Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.35■□□□□ 0.69
CHD7Q9P2D1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 AL139400.1-201ENST00000366220 510 ntBASIC19.34■□□□□ 0.69
CHD7Q9P2D1 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 AL024508.2-201ENST00000607749 1894 ntBASIC19.34■□□□□ 0.69
CHD7Q9P2D1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 HEIH-201ENST00000623091 1652 ntBASIC19.34■□□□□ 0.69
CHD7Q9P2D1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 AC092865.6-201ENST00000642101 219 ntBASIC19.34■□□□□ 0.69
CHD7Q9P2D1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 FEM1AP3-201ENST00000403722 1741 ntBASIC19.34■□□□□ 0.69
CHD7Q9P2D1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD7Q9P2D1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.33■□□□□ 0.69
CHD7Q9P2D1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CHD7Q9P2D1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.33■□□□□ 0.69
CHD7Q9P2D1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.33■□□□□ 0.69
CHD7Q9P2D1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.33■□□□□ 0.69
CHD7Q9P2D1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.69
CHD7Q9P2D1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.33■□□□□ 0.69
CHD7Q9P2D1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.33■□□□□ 0.69
CHD7Q9P2D1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.33■□□□□ 0.69
CHD7Q9P2D1 AC005829.1-201ENST00000570002 483 ntBASIC19.33■□□□□ 0.69
CHD7Q9P2D1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHD7Q9P2D1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.33■□□□□ 0.69
CHD7Q9P2D1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHD7Q9P2D1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
CHD7Q9P2D1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHD7Q9P2D1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD7Q9P2D1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHD7Q9P2D1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHD7Q9P2D1 LAGE3P1-201ENST00000425356 484 ntBASIC19.33■□□□□ 0.68
CHD7Q9P2D1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.33■□□□□ 0.68
CHD7Q9P2D1 AC105339.3-201ENST00000560043 636 ntBASIC19.33■□□□□ 0.68
CHD7Q9P2D1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD7Q9P2D1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD7Q9P2D1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD7Q9P2D1 AC073621.1-201ENST00000392730 636 ntBASIC19.32■□□□□ 0.68
CHD7Q9P2D1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 AL096865.1-201ENST00000606796 927 ntBASIC19.32■□□□□ 0.68
CHD7Q9P2D1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 AC108751.1-201ENST00000490852 363 ntBASIC19.32■□□□□ 0.68
CHD7Q9P2D1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD7Q9P2D1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 AL078644.1-201ENST00000609881 752 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms