Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.93■□□□□ 0.62
HPS4Q9NQG7 AL353692.3-201ENST00000407031 1396 ntBASIC18.93■□□□□ 0.62
HPS4Q9NQG7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 KRT89P-201ENST00000620027 1478 ntBASIC18.92■□□□□ 0.62
HPS4Q9NQG7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 AC009065.1-201ENST00000564055 1225 ntBASIC18.92■□□□□ 0.62
HPS4Q9NQG7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 LINC01711-201ENST00000598340 967 ntBASIC18.92■□□□□ 0.62
HPS4Q9NQG7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
HPS4Q9NQG7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 AC093484.2-201ENST00000580996 2166 ntBASIC18.91■□□□□ 0.62
HPS4Q9NQG7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 KRT16P4-201ENST00000453883 522 ntBASIC18.91■□□□□ 0.62
HPS4Q9NQG7 KRT18P41-201ENST00000518924 1277 ntBASIC18.91■□□□□ 0.62
HPS4Q9NQG7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HPS4Q9NQG7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 AP002469.2-201ENST00000531724 424 ntBASIC18.9■□□□□ 0.62
HPS4Q9NQG7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 AL353801.3-201ENST00000609898 542 ntBASIC18.9■□□□□ 0.62
HPS4Q9NQG7 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.9■□□□□ 0.62
HPS4Q9NQG7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms