Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 AL596442.2-201ENST00000610240 980 ntBASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.85■□□□□ 0.93
ZFYVE28Q9HCC9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 METTL21AP1-201ENST00000438852 635 ntBASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZFYVE28Q9HCC9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
ZFYVE28Q9HCC9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZFYVE28Q9HCC9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
ZFYVE28Q9HCC9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.83■□□□□ 0.93
ZFYVE28Q9HCC9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZFYVE28Q9HCC9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZFYVE28Q9HCC9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZFYVE28Q9HCC9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZFYVE28Q9HCC9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZFYVE28Q9HCC9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZFYVE28Q9HCC9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
ZFYVE28Q9HCC9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.83■□□□□ 0.93
ZFYVE28Q9HCC9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.83■□□□□ 0.93
ZFYVE28Q9HCC9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.83■□□□□ 0.93
ZFYVE28Q9HCC9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZFYVE28Q9HCC9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZFYVE28Q9HCC9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZFYVE28Q9HCC9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
ZFYVE28Q9HCC9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
ZFYVE28Q9HCC9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZFYVE28Q9HCC9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZFYVE28Q9HCC9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZFYVE28Q9HCC9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 SNHG9-202ENST00000564014 471 ntBASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 AC005829.1-201ENST00000570002 483 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms