Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 AC007967.2-201ENST00000432613 625 ntBASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 UNC93B6-202ENST00000528242 690 ntBASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 OR7E14P-202ENST00000530490 1290 ntBASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 AL355385.1-201ENST00000606123 409 ntBASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 Z83851.2-201ENST00000609564 659 ntBASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 FAM197Y3-203ENST00000618346 717 ntBASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP4-1Q9BYQ7 AL356309.3-201ENST00000624132 1934 ntBASIC9.46□□□□□ -0.89
KRTAP4-1Q9BYQ7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.89
KRTAP4-1Q9BYQ7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP4-1Q9BYQ7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP4-1Q9BYQ7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP4-1Q9BYQ7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP4-1Q9BYQ7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP4-1Q9BYQ7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP4-1Q9BYQ7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
KRTAP4-1Q9BYQ7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
KRTAP4-1Q9BYQ7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 KRT18P3-201ENST00000451602 1288 ntBASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC027796.2-201ENST00000575326 344 ntBASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 LINC02084-201ENST00000606069 1096 ntBASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC009154.2-201ENST00000621177 724 ntBASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC083906.6-201ENST00000641366 219 ntBASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 MYLKP1-201ENST00000509077 1580 ntBASIC9.46□□□□□ -0.9
KRTAP4-1Q9BYQ7 HLA-J-201ENST00000462773 1622 ntBASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP4-1Q9BYQ7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms