Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
ARID3AQ99856 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 SDHAP1-207ENST00000440850 2000 ntBASIC20.81■□□□□ 0.92
ARID3AQ99856 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ARID3AQ99856 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.81■□□□□ 0.92
ARID3AQ99856 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ARID3AQ99856 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
ARID3AQ99856 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARID3AQ99856 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.8■□□□□ 0.92
ARID3AQ99856 AC104417.2-201ENST00000562989 1793 ntBASIC20.8■□□□□ 0.92
ARID3AQ99856 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARID3AQ99856 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ARID3AQ99856 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ARID3AQ99856 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.8■□□□□ 0.92
ARID3AQ99856 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ARID3AQ99856 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARID3AQ99856 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARID3AQ99856 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ARID3AQ99856 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARID3AQ99856 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARID3AQ99856 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ARID3AQ99856 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.8■□□□□ 0.92
ARID3AQ99856 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.8■□□□□ 0.92
ARID3AQ99856 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.8■□□□□ 0.92
ARID3AQ99856 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.8■□□□□ 0.92
ARID3AQ99856 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.8■□□□□ 0.92
ARID3AQ99856 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ARID3AQ99856 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.8■□□□□ 0.92
ARID3AQ99856 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.8■□□□□ 0.92
ARID3AQ99856 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARID3AQ99856 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.8■□□□□ 0.92
ARID3AQ99856 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ARID3AQ99856 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.8■□□□□ 0.92
ARID3AQ99856 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.8■□□□□ 0.92
ARID3AQ99856 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ARID3AQ99856 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ARID3AQ99856 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.8■□□□□ 0.92
ARID3AQ99856 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ARID3AQ99856 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARID3AQ99856 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ARID3AQ99856 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.79■□□□□ 0.92
ARID3AQ99856 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ARID3AQ99856 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARID3AQ99856 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.79■□□□□ 0.92
ARID3AQ99856 AC008741.2-201ENST00000612792 3115 ntBASIC20.79■□□□□ 0.92
ARID3AQ99856 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ARID3AQ99856 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ARID3AQ99856 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ARID3AQ99856 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ARID3AQ99856 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.79■□□□□ 0.92
ARID3AQ99856 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.79■□□□□ 0.92
ARID3AQ99856 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ARID3AQ99856 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.79■□□□□ 0.92
ARID3AQ99856 HLA-A-209ENST00000638375 975 ntBASIC20.79■□□□□ 0.92
ARID3AQ99856 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ARID3AQ99856 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARID3AQ99856 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARID3AQ99856 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARID3AQ99856 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARID3AQ99856 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.79■□□□□ 0.92
ARID3AQ99856 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
ARID3AQ99856 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.79■□□□□ 0.92
ARID3AQ99856 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.79■□□□□ 0.92
ARID3AQ99856 AC006333.2-201ENST00000607957 2099 ntBASIC20.79■□□□□ 0.92
ARID3AQ99856 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ARID3AQ99856 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARID3AQ99856 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.78■□□□□ 0.92
ARID3AQ99856 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
ARID3AQ99856 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
ARID3AQ99856 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.78■□□□□ 0.92
ARID3AQ99856 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ARID3AQ99856 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ARID3AQ99856 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.78■□□□□ 0.92
ARID3AQ99856 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.78■□□□□ 0.92
ARID3AQ99856 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.78■□□□□ 0.92
ARID3AQ99856 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARID3AQ99856 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms