Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FGD4Q96M96 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.69■□□□□ 0.9
FGD4Q96M96 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
FGD4Q96M96 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
FGD4Q96M96 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.69■□□□□ 0.9
FGD4Q96M96 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.69■□□□□ 0.9
FGD4Q96M96 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FGD4Q96M96 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.69■□□□□ 0.9
FGD4Q96M96 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FGD4Q96M96 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
FGD4Q96M96 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FGD4Q96M96 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FGD4Q96M96 AC023511.2-201ENST00000618803 211 ntBASIC20.69■□□□□ 0.9
FGD4Q96M96 AC148477.8-201ENST00000624298 468 ntBASIC20.69■□□□□ 0.9
FGD4Q96M96 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FGD4Q96M96 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FGD4Q96M96 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FGD4Q96M96 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.69■□□□□ 0.9
FGD4Q96M96 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FGD4Q96M96 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FGD4Q96M96 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FGD4Q96M96 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.69■□□□□ 0.9
FGD4Q96M96 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.68■□□□□ 0.9
FGD4Q96M96 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.68■□□□□ 0.9
FGD4Q96M96 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.68■□□□□ 0.9
FGD4Q96M96 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.68■□□□□ 0.9
FGD4Q96M96 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.68■□□□□ 0.9
FGD4Q96M96 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.68■□□□□ 0.9
FGD4Q96M96 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.68■□□□□ 0.9
FGD4Q96M96 AL591684.3-201ENST00000605187 298 ntBASIC20.68■□□□□ 0.9
FGD4Q96M96 BX640515.1-201ENST00000617215 977 ntBASIC20.68■□□□□ 0.9
FGD4Q96M96 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FGD4Q96M96 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.68■□□□□ 0.9
FGD4Q96M96 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.68■□□□□ 0.9
FGD4Q96M96 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.68■□□□□ 0.9
FGD4Q96M96 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FGD4Q96M96 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FGD4Q96M96 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FGD4Q96M96 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.67■□□□□ 0.9
FGD4Q96M96 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.67■□□□□ 0.9
FGD4Q96M96 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FGD4Q96M96 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FGD4Q96M96 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FGD4Q96M96 RCN1P2-201ENST00000398357 915 ntBASIC20.67■□□□□ 0.9
FGD4Q96M96 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.67■□□□□ 0.9
FGD4Q96M96 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.67■□□□□ 0.9
FGD4Q96M96 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.67■□□□□ 0.9
FGD4Q96M96 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.67■□□□□ 0.9
FGD4Q96M96 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.67■□□□□ 0.9
FGD4Q96M96 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FGD4Q96M96 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FGD4Q96M96 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FGD4Q96M96 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FGD4Q96M96 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FGD4Q96M96 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.67■□□□□ 0.9
FGD4Q96M96 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FGD4Q96M96 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FGD4Q96M96 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.66■□□□□ 0.9
FGD4Q96M96 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FGD4Q96M96 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.66■□□□□ 0.9
FGD4Q96M96 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
FGD4Q96M96 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.66■□□□□ 0.9
FGD4Q96M96 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
FGD4Q96M96 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
FGD4Q96M96 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FGD4Q96M96 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.66■□□□□ 0.9
FGD4Q96M96 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
FGD4Q96M96 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
FGD4Q96M96 AC120114.3-201ENST00000611923 658 ntBASIC20.66■□□□□ 0.9
FGD4Q96M96 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
FGD4Q96M96 LINC01126-201ENST00000623515 1646 ntBASIC20.66■□□□□ 0.9
FGD4Q96M96 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.66■□□□□ 0.9
FGD4Q96M96 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
FGD4Q96M96 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FGD4Q96M96 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FGD4Q96M96 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FGD4Q96M96 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
FGD4Q96M96 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.66■□□□□ 0.9
FGD4Q96M96 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FGD4Q96M96 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FGD4Q96M96 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FGD4Q96M96 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms