Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CALR3Q96L12 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CALR3Q96L12 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CALR3Q96L12 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CALR3Q96L12 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
CALR3Q96L12 SDHAP2-201ENST00000455183 2001 ntBASIC19.38■□□□□ 0.69
CALR3Q96L12 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CALR3Q96L12 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.38■□□□□ 0.69
CALR3Q96L12 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.38■□□□□ 0.69
CALR3Q96L12 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.38■□□□□ 0.69
CALR3Q96L12 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.38■□□□□ 0.69
CALR3Q96L12 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.38■□□□□ 0.69
CALR3Q96L12 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CALR3Q96L12 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CALR3Q96L12 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CALR3Q96L12 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.38■□□□□ 0.69
CALR3Q96L12 PRORSD1P-202ENST00000563365 2154 ntBASIC19.37■□□□□ 0.69
CALR3Q96L12 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CALR3Q96L12 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.37■□□□□ 0.69
CALR3Q96L12 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.37■□□□□ 0.69
CALR3Q96L12 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.37■□□□□ 0.69
CALR3Q96L12 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CALR3Q96L12 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CALR3Q96L12 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CALR3Q96L12 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.37■□□□□ 0.69
CALR3Q96L12 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.37■□□□□ 0.69
CALR3Q96L12 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.37■□□□□ 0.69
CALR3Q96L12 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.37■□□□□ 0.69
CALR3Q96L12 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CALR3Q96L12 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
CALR3Q96L12 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.37■□□□□ 0.69
CALR3Q96L12 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CALR3Q96L12 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
CALR3Q96L12 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CALR3Q96L12 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.36■□□□□ 0.69
CALR3Q96L12 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.36■□□□□ 0.69
CALR3Q96L12 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CALR3Q96L12 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CALR3Q96L12 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.36■□□□□ 0.69
CALR3Q96L12 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.36■□□□□ 0.69
CALR3Q96L12 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.36■□□□□ 0.69
CALR3Q96L12 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CALR3Q96L12 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CALR3Q96L12 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CALR3Q96L12 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CALR3Q96L12 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.36■□□□□ 0.69
CALR3Q96L12 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.36■□□□□ 0.69
CALR3Q96L12 AP005242.2-201ENST00000580065 1175 ntBASIC19.36■□□□□ 0.69
CALR3Q96L12 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.36■□□□□ 0.69
CALR3Q96L12 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.36■□□□□ 0.69
CALR3Q96L12 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.36■□□□□ 0.69
CALR3Q96L12 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CALR3Q96L12 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CALR3Q96L12 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CALR3Q96L12 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CALR3Q96L12 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CALR3Q96L12 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CALR3Q96L12 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CALR3Q96L12 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CALR3Q96L12 AC093010.1-201ENST00000473625 1624 ntBASIC19.36■□□□□ 0.69
CALR3Q96L12 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CALR3Q96L12 KRT18P55-202ENST00000578578 1546 ntBASIC19.35■□□□□ 0.69
CALR3Q96L12 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CALR3Q96L12 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CALR3Q96L12 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CALR3Q96L12 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CALR3Q96L12 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.35■□□□□ 0.69
CALR3Q96L12 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CALR3Q96L12 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.35■□□□□ 0.69
CALR3Q96L12 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.35■□□□□ 0.69
CALR3Q96L12 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CALR3Q96L12 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CALR3Q96L12 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CALR3Q96L12 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CALR3Q96L12 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.35■□□□□ 0.69
CALR3Q96L12 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CALR3Q96L12 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CALR3Q96L12 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CALR3Q96L12 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.35■□□□□ 0.69
CALR3Q96L12 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CALR3Q96L12 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CALR3Q96L12 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CALR3Q96L12 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms