Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX1Q92499 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.52■□□□□ 0.72
DDX1Q92499 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX1Q92499 AL512604.3-201ENST00000569583 964 ntBASIC19.52■□□□□ 0.72
DDX1Q92499 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
DDX1Q92499 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX1Q92499 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX1Q92499 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
DDX1Q92499 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX1Q92499 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX1Q92499 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
DDX1Q92499 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX1Q92499 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX1Q92499 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX1Q92499 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX1Q92499 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX1Q92499 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
DDX1Q92499 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX1Q92499 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
DDX1Q92499 AC068880.1-201ENST00000507289 2297 ntBASIC19.51■□□□□ 0.71
DDX1Q92499 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
DDX1Q92499 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX1Q92499 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX1Q92499 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX1Q92499 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
DDX1Q92499 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX1Q92499 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.51■□□□□ 0.71
DDX1Q92499 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX1Q92499 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.51■□□□□ 0.71
DDX1Q92499 AC092647.4-201ENST00000457211 535 ntBASIC19.51■□□□□ 0.71
DDX1Q92499 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX1Q92499 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.51■□□□□ 0.71
DDX1Q92499 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX1Q92499 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX1Q92499 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
DDX1Q92499 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX1Q92499 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.51■□□□□ 0.71
DDX1Q92499 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX1Q92499 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX1Q92499 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX1Q92499 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX1Q92499 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX1Q92499 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX1Q92499 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX1Q92499 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 AC008764.6-201ENST00000595909 2069 ntBASIC19.5■□□□□ 0.71
DDX1Q92499 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX1Q92499 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.5■□□□□ 0.71
DDX1Q92499 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.5■□□□□ 0.71
DDX1Q92499 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX1Q92499 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
DDX1Q92499 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.5■□□□□ 0.71
DDX1Q92499 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.5■□□□□ 0.71
DDX1Q92499 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
DDX1Q92499 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX1Q92499 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
DDX1Q92499 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
DDX1Q92499 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.5■□□□□ 0.71
DDX1Q92499 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX1Q92499 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX1Q92499 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.5■□□□□ 0.71
DDX1Q92499 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX1Q92499 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX1Q92499 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
DDX1Q92499 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX1Q92499 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX1Q92499 AC138028.4-201ENST00000564984 1845 ntBASIC19.49■□□□□ 0.71
DDX1Q92499 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
DDX1Q92499 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX1Q92499 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX1Q92499 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.49■□□□□ 0.71
DDX1Q92499 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX1Q92499 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.49■□□□□ 0.71
DDX1Q92499 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.49■□□□□ 0.71
DDX1Q92499 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.49■□□□□ 0.71
DDX1Q92499 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.49■□□□□ 0.71
DDX1Q92499 AL121956.5-201ENST00000625261 221 ntBASIC19.49■□□□□ 0.71
DDX1Q92499 AC141257.4-201ENST00000634557 245 ntBASIC19.49■□□□□ 0.71
DDX1Q92499 AC136944.6-201ENST00000634818 245 ntBASIC19.49■□□□□ 0.71
DDX1Q92499 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
DDX1Q92499 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX1Q92499 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX1Q92499 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
DDX1Q92499 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDX1Q92499 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
DDX1Q92499 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
DDX1Q92499 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms