Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 RN7SL850P-201ENST00000579959 291 ntBASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATPAF2Q8N5M1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATPAF2Q8N5M1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.77■□□□□ 0.59
ATPAF2Q8N5M1 AC135776.1-201ENST00000319817 2481 ntBASIC18.77■□□□□ 0.59
ATPAF2Q8N5M1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.77■□□□□ 0.59
ATPAF2Q8N5M1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
ATPAF2Q8N5M1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.77■□□□□ 0.59
ATPAF2Q8N5M1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 RNF152P1-201ENST00000397754 604 ntBASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 AK4P3-201ENST00000418260 669 ntBASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 RASA4DP-201ENST00000460726 1199 ntBASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATPAF2Q8N5M1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms