Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19■□□□□ 0.63
SCML4Q8N228 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19■□□□□ 0.63
SCML4Q8N228 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19■□□□□ 0.63
SCML4Q8N228 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19■□□□□ 0.63
SCML4Q8N228 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19■□□□□ 0.63
SCML4Q8N228 NPAP1P7-201ENST00000613027 823 ntBASIC19■□□□□ 0.63
SCML4Q8N228 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCML4Q8N228 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19■□□□□ 0.63
SCML4Q8N228 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCML4Q8N228 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SCML4Q8N228 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCML4Q8N228 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SCML4Q8N228 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19■□□□□ 0.63
SCML4Q8N228 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SCML4Q8N228 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19■□□□□ 0.63
SCML4Q8N228 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCML4Q8N228 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCML4Q8N228 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19■□□□□ 0.63
SCML4Q8N228 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SCML4Q8N228 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.99■□□□□ 0.63
SCML4Q8N228 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SCML4Q8N228 UPK3BP1-201ENST00000428678 509 ntBASIC18.99■□□□□ 0.63
SCML4Q8N228 KRT18P65-201ENST00000439811 1286 ntBASIC18.99■□□□□ 0.63
SCML4Q8N228 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.99■□□□□ 0.63
SCML4Q8N228 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.99■□□□□ 0.63
SCML4Q8N228 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SCML4Q8N228 DUTP2-201ENST00000519164 463 ntBASIC18.99■□□□□ 0.63
SCML4Q8N228 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SCML4Q8N228 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.99■□□□□ 0.63
SCML4Q8N228 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 AC009154.2-201ENST00000621177 724 ntBASIC18.99■□□□□ 0.63
SCML4Q8N228 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.99■□□□□ 0.63
SCML4Q8N228 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.99■□□□□ 0.63
SCML4Q8N228 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.99■□□□□ 0.63
SCML4Q8N228 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.99■□□□□ 0.63
SCML4Q8N228 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.99■□□□□ 0.63
SCML4Q8N228 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCML4Q8N228 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SCML4Q8N228 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.98■□□□□ 0.63
SCML4Q8N228 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.98■□□□□ 0.63
SCML4Q8N228 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SCML4Q8N228 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.98■□□□□ 0.63
SCML4Q8N228 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 GUSBP12-201ENST00000513727 720 ntBASIC18.98■□□□□ 0.63
SCML4Q8N228 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 AL353801.3-201ENST00000609898 542 ntBASIC18.98■□□□□ 0.63
SCML4Q8N228 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.98■□□□□ 0.63
SCML4Q8N228 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCML4Q8N228 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SCML4Q8N228 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.97■□□□□ 0.63
SCML4Q8N228 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.97■□□□□ 0.63
SCML4Q8N228 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.97■□□□□ 0.63
SCML4Q8N228 AP002383.4-201ENST00000442518 975 ntBASIC18.97■□□□□ 0.63
SCML4Q8N228 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.97■□□□□ 0.63
SCML4Q8N228 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 AC132938.6-201ENST00000623828 1655 ntBASIC18.97■□□□□ 0.63
SCML4Q8N228 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCML4Q8N228 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms