Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 MINOS1P3-201ENST00000457048 203 ntBASIC19.35■□□□□ 0.69
VARS2Q5ST30 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.35■□□□□ 0.69
VARS2Q5ST30 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VARS2Q5ST30 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARS2Q5ST30 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARS2Q5ST30 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARS2Q5ST30 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.34■□□□□ 0.69
VARS2Q5ST30 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARS2Q5ST30 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARS2Q5ST30 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARS2Q5ST30 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VARS2Q5ST30 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARS2Q5ST30 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VARS2Q5ST30 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
VARS2Q5ST30 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.34■□□□□ 0.69
VARS2Q5ST30 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.34■□□□□ 0.69
VARS2Q5ST30 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.34■□□□□ 0.69
VARS2Q5ST30 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARS2Q5ST30 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARS2Q5ST30 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VARS2Q5ST30 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
VARS2Q5ST30 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VARS2Q5ST30 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
VARS2Q5ST30 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
VARS2Q5ST30 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VARS2Q5ST30 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.33■□□□□ 0.69
VARS2Q5ST30 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
VARS2Q5ST30 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VARS2Q5ST30 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
VARS2Q5ST30 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VARS2Q5ST30 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VARS2Q5ST30 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.33■□□□□ 0.68
VARS2Q5ST30 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.33■□□□□ 0.68
VARS2Q5ST30 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
VARS2Q5ST30 NUS1P2-201ENST00000417358 873 ntBASIC19.33■□□□□ 0.68
VARS2Q5ST30 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.33■□□□□ 0.68
VARS2Q5ST30 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.33■□□□□ 0.68
VARS2Q5ST30 AL031008.1-201ENST00000619963 541 ntBASIC19.33■□□□□ 0.68
VARS2Q5ST30 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VARS2Q5ST30 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VARS2Q5ST30 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.33■□□□□ 0.68
VARS2Q5ST30 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VARS2Q5ST30 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VARS2Q5ST30 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VARS2Q5ST30 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VARS2Q5ST30 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
VARS2Q5ST30 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.32■□□□□ 0.68
VARS2Q5ST30 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
VARS2Q5ST30 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
VARS2Q5ST30 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.32■□□□□ 0.68
VARS2Q5ST30 AC079781.3-201ENST00000449110 356 ntBASIC19.32■□□□□ 0.68
VARS2Q5ST30 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.32■□□□□ 0.68
VARS2Q5ST30 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC19.32■□□□□ 0.68
VARS2Q5ST30 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.32■□□□□ 0.68
VARS2Q5ST30 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARS2Q5ST30 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
VARS2Q5ST30 LINC00602-201ENST00000629776 2065 ntBASIC19.31■□□□□ 0.68
VARS2Q5ST30 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VARS2Q5ST30 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.31■□□□□ 0.68
VARS2Q5ST30 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VARS2Q5ST30 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VARS2Q5ST30 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VARS2Q5ST30 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.31■□□□□ 0.68
VARS2Q5ST30 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
VARS2Q5ST30 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VARS2Q5ST30 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.31■□□□□ 0.68
VARS2Q5ST30 KRT16P4-201ENST00000453883 522 ntBASIC19.31■□□□□ 0.68
VARS2Q5ST30 AC068472.1-201ENST00000474589 881 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms