Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCL20P78556 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL20P78556 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CCL20P78556 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL20P78556 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CCL20P78556 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CCL20P78556 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL20P78556 KRT18P16-201ENST00000510337 1294 ntBASIC14.44□□□□□ -0.1
CCL20P78556 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.44□□□□□ -0.1
CCL20P78556 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL20P78556 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL20P78556 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL20P78556 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCL20P78556 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 PCDHA1-201ENST00000378133 2726 ntBASIC14.44□□□□□ -0.1
CCL20P78556 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCL20P78556 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CCL20P78556 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCL20P78556 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL20P78556 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 KRT8P32-201ENST00000512863 1461 ntBASIC14.44□□□□□ -0.1
CCL20P78556 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCL20P78556 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.43□□□□□ -0.1
CCL20P78556 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.43□□□□□ -0.1
CCL20P78556 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL20P78556 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCL20P78556 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 PHGDH-209ENST00000641074 1780 ntBASIC14.43□□□□□ -0.1
CCL20P78556 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL20P78556 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCL20P78556 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.43□□□□□ -0.1
CCL20P78556 LINC00554-201ENST00000564841 3011 ntBASIC14.43□□□□□ -0.1
CCL20P78556 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL20P78556 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCL20P78556 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL20P78556 MYLKP1-201ENST00000509077 1580 ntBASIC14.43□□□□□ -0.1
CCL20P78556 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CCL20P78556 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL20P78556 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCL20P78556 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL20P78556 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL20P78556 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCL20P78556 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCL20P78556 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 AL355312.1-201ENST00000407115 2176 ntBASIC14.42□□□□□ -0.1
CCL20P78556 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.42□□□□□ -0.1
CCL20P78556 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL20P78556 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.42□□□□□ -0.1
CCL20P78556 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL20P78556 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCL20P78556 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL20P78556 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL20P78556 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms