Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H3AP68431 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.01■□□□□ 0.15
HIST1H3AP68431 AL096828.2-201ENST00000567259 1965 ntBASIC16.01■□□□□ 0.15
HIST1H3AP68431 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.01■□□□□ 0.15
HIST1H3AP68431 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
HIST1H3AP68431 AP000523.1-201ENST00000398242 1049 ntBASIC16.01■□□□□ 0.15
HIST1H3AP68431 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.01■□□□□ 0.15
HIST1H3AP68431 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.01■□□□□ 0.15
HIST1H3AP68431 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.01■□□□□ 0.15
HIST1H3AP68431 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.01■□□□□ 0.15
HIST1H3AP68431 MIR3917-201ENST00000580971 93 ntBASIC16.01■□□□□ 0.15
HIST1H3AP68431 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.01■□□□□ 0.15
HIST1H3AP68431 AC012306.2-201ENST00000609350 630 ntBASIC16.01■□□□□ 0.15
HIST1H3AP68431 AC141257.4-201ENST00000634557 245 ntBASIC16.01■□□□□ 0.15
HIST1H3AP68431 AC136944.6-201ENST00000634818 245 ntBASIC16.01■□□□□ 0.15
HIST1H3AP68431 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HIST1H3AP68431 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.01■□□□□ 0.15
HIST1H3AP68431 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H3AP68431 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H3AP68431 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.01■□□□□ 0.15
HIST1H3AP68431 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H3AP68431 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H3AP68431 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H3AP68431 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H3AP68431 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HIST1H3AP68431 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16■□□□□ 0.15
HIST1H3AP68431 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
HIST1H3AP68431 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16■□□□□ 0.15
HIST1H3AP68431 FLJ13224-201ENST00000313737 1514 ntBASIC16■□□□□ 0.15
HIST1H3AP68431 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16■□□□□ 0.15
HIST1H3AP68431 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16■□□□□ 0.15
HIST1H3AP68431 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
HIST1H3AP68431 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16■□□□□ 0.15
HIST1H3AP68431 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
HIST1H3AP68431 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16■□□□□ 0.15
HIST1H3AP68431 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HIST1H3AP68431 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16■□□□□ 0.15
HIST1H3AP68431 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
HIST1H3AP68431 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HIST1H3AP68431 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16■□□□□ 0.15
HIST1H3AP68431 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HIST1H3AP68431 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16■□□□□ 0.15
HIST1H3AP68431 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HIST1H3AP68431 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 AC093010.1-201ENST00000473625 1624 ntBASIC15.99■□□□□ 0.15
HIST1H3AP68431 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 SLC25A3P1-201ENST00000443844 931 ntBASIC15.99■□□□□ 0.15
HIST1H3AP68431 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 REXO1L9P-201ENST00000604264 2108 ntBASIC15.99■□□□□ 0.15
HIST1H3AP68431 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 AC097493.4-201ENST00000641197 219 ntBASIC15.99■□□□□ 0.15
HIST1H3AP68431 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 AC008764.6-201ENST00000595909 2069 ntBASIC15.99■□□□□ 0.15
HIST1H3AP68431 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST1H3AP68431 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H3AP68431 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HIST1H3AP68431 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H3AP68431 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms