Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 TERF1P5-201ENST00000477545 1207 ntBASIC14.24□□□□□ -0.13
ERVFC1-1P60608 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 AC073111.5-205ENST00000641717 521 ntBASIC14.24□□□□□ -0.13
ERVFC1-1P60608 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.24□□□□□ -0.13
ERVFC1-1P60608 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 AC108860.2-201ENST00000562760 2183 ntBASIC14.23□□□□□ -0.13
ERVFC1-1P60608 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 NKILA-202ENST00000614771 2598 ntBASIC14.23□□□□□ -0.13
ERVFC1-1P60608 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 KRT18P61-201ENST00000585825 1298 ntBASIC14.23□□□□□ -0.13
ERVFC1-1P60608 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 AC092850.2-201ENST00000623821 2697 ntBASIC14.23□□□□□ -0.13
ERVFC1-1P60608 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ERVFC1-1P60608 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 HLA-L-209ENST00000420110 1011 ntBASIC14.22□□□□□ -0.13
ERVFC1-1P60608 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.22□□□□□ -0.13
ERVFC1-1P60608 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms