Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.49■□□□□ 0.55
LIMK2P53671 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LIMK2P53671 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LIMK2P53671 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.48■□□□□ 0.55
LIMK2P53671 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LIMK2P53671 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.48■□□□□ 0.55
LIMK2P53671 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.48■□□□□ 0.55
LIMK2P53671 AL512604.3-201ENST00000569583 964 ntBASIC18.48■□□□□ 0.55
LIMK2P53671 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.48■□□□□ 0.55
LIMK2P53671 AC139887.4-201ENST00000607877 719 ntBASIC18.48■□□□□ 0.55
LIMK2P53671 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.48■□□□□ 0.55
LIMK2P53671 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LIMK2P53671 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LIMK2P53671 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LIMK2P53671 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LIMK2P53671 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
LIMK2P53671 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.47■□□□□ 0.55
LIMK2P53671 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.47■□□□□ 0.55
LIMK2P53671 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
LIMK2P53671 MIR564-202ENST00000385049 94 ntBASIC18.47■□□□□ 0.55
LIMK2P53671 AP000593.1-201ENST00000393668 712 ntBASIC18.47■□□□□ 0.55
LIMK2P53671 RNF152P1-201ENST00000397754 604 ntBASIC18.47■□□□□ 0.55
LIMK2P53671 AL023284.2-201ENST00000405850 579 ntBASIC18.47■□□□□ 0.55
LIMK2P53671 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.47■□□□□ 0.55
LIMK2P53671 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.47■□□□□ 0.55
LIMK2P53671 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.47■□□□□ 0.55
LIMK2P53671 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.47■□□□□ 0.55
LIMK2P53671 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIMK2P53671 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.46■□□□□ 0.55
LIMK2P53671 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LIMK2P53671 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LIMK2P53671 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LIMK2P53671 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LIMK2P53671 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LIMK2P53671 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LIMK2P53671 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LIMK2P53671 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.46■□□□□ 0.55
LIMK2P53671 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.46■□□□□ 0.55
LIMK2P53671 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.46■□□□□ 0.55
LIMK2P53671 MCCD1P1-208ENST00000445732 328 ntBASIC18.46■□□□□ 0.55
LIMK2P53671 COX11P1-201ENST00000489116 835 ntBASIC18.46■□□□□ 0.55
LIMK2P53671 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LIMK2P53671 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.46■□□□□ 0.55
LIMK2P53671 AC141257.4-201ENST00000634557 245 ntBASIC18.46■□□□□ 0.55
LIMK2P53671 AC136944.6-201ENST00000634818 245 ntBASIC18.46■□□□□ 0.55
LIMK2P53671 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LIMK2P53671 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LIMK2P53671 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.46■□□□□ 0.55
LIMK2P53671 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LIMK2P53671 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LIMK2P53671 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.46■□□□□ 0.55
LIMK2P53671 GPAT2P1-201ENST00000444924 1672 ntBASIC18.46■□□□□ 0.55
LIMK2P53671 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
LIMK2P53671 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LIMK2P53671 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LIMK2P53671 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.46■□□□□ 0.55
LIMK2P53671 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
LIMK2P53671 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LIMK2P53671 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LIMK2P53671 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
LIMK2P53671 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LIMK2P53671 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIMK2P53671 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LIMK2P53671 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIMK2P53671 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.45■□□□□ 0.54
LIMK2P53671 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIMK2P53671 AC138028.4-201ENST00000564984 1845 ntBASIC18.45■□□□□ 0.54
LIMK2P53671 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIMK2P53671 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms