Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA11P31270 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA11P31270 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HOXA11P31270 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXA11P31270 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA11P31270 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA11P31270 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXA11P31270 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.75■□□□□ 0.75
HOXA11P31270 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA11P31270 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 AC073592.3-201ENST00000625118 1834 ntBASIC19.74■□□□□ 0.75
HOXA11P31270 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HOXA11P31270 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXA11P31270 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HOXA11P31270 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 MTCL1P1-201ENST00000446207 792 ntBASIC19.74■□□□□ 0.75
HOXA11P31270 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 FDX1P1-201ENST00000449115 551 ntBASIC19.74■□□□□ 0.75
HOXA11P31270 KRT16P4-201ENST00000453883 522 ntBASIC19.74■□□□□ 0.75
HOXA11P31270 MINOS1P3-201ENST00000457048 203 ntBASIC19.74■□□□□ 0.75
HOXA11P31270 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXA11P31270 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXA11P31270 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXA11P31270 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXA11P31270 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXA11P31270 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXA11P31270 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HOXA11P31270 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA11P31270 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
HOXA11P31270 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXA11P31270 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA11P31270 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA11P31270 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA11P31270 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXA11P31270 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HOXA11P31270 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA11P31270 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA11P31270 AC098818.2-201ENST00000564925 2320 ntBASIC19.73■□□□□ 0.75
HOXA11P31270 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXA11P31270 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA11P31270 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXA11P31270 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA11P31270 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA11P31270 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA11P31270 POM121L3P-201ENST00000419331 1163 ntBASIC19.73■□□□□ 0.75
HOXA11P31270 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXA11P31270 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXA11P31270 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXA11P31270 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA11P31270 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXA11P31270 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HOXA11P31270 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA11P31270 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXA11P31270 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA11P31270 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HOXA11P31270 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXA11P31270 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXA11P31270 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HOXA11P31270 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXA11P31270 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXA11P31270 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
HOXA11P31270 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXA11P31270 KRT18P65-201ENST00000439811 1286 ntBASIC19.72■□□□□ 0.75
HOXA11P31270 AC079781.3-201ENST00000449110 356 ntBASIC19.72■□□□□ 0.75
HOXA11P31270 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXA11P31270 AL031008.1-201ENST00000619963 541 ntBASIC19.72■□□□□ 0.75
HOXA11P31270 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA11P31270 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXA11P31270 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms