Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARSP26640 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARSP26640 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARSP26640 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARSP26640 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.02■□□□□ 0.48
VARSP26640 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VARSP26640 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARSP26640 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARSP26640 SLC25A1P2-201ENST00000430693 912 ntBASIC18.02■□□□□ 0.48
VARSP26640 MCCD1P1-208ENST00000445732 328 ntBASIC18.02■□□□□ 0.48
VARSP26640 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
VARSP26640 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARSP26640 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.02■□□□□ 0.48
VARSP26640 AP003041.3-201ENST00000527151 707 ntBASIC18.02■□□□□ 0.48
VARSP26640 EGLN1P1-201ENST00000531623 762 ntBASIC18.02■□□□□ 0.48
VARSP26640 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.02■□□□□ 0.48
VARSP26640 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.02■□□□□ 0.48
VARSP26640 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
VARSP26640 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.02■□□□□ 0.47
VARSP26640 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.02■□□□□ 0.47
VARSP26640 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VARSP26640 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
VARSP26640 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
VARSP26640 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VARSP26640 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.01■□□□□ 0.47
VARSP26640 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.01■□□□□ 0.47
VARSP26640 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARSP26640 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.01■□□□□ 0.47
VARSP26640 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.01■□□□□ 0.47
VARSP26640 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARSP26640 INGX-201ENST00000359239 846 ntBASIC18.01■□□□□ 0.47
VARSP26640 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.01■□□□□ 0.47
VARSP26640 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VARSP26640 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
VARSP26640 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.01■□□□□ 0.47
VARSP26640 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VARSP26640 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARSP26640 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.01■□□□□ 0.47
VARSP26640 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.01■□□□□ 0.47
VARSP26640 NTF6B-201ENST00000591913 560 ntBASIC18.01■□□□□ 0.47
VARSP26640 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VARSP26640 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.01■□□□□ 0.47
VARSP26640 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
VARSP26640 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VARSP26640 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
VARSP26640 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
VARSP26640 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARSP26640 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARSP26640 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VARSP26640 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.01■□□□□ 0.47
VARSP26640 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18■□□□□ 0.47
VARSP26640 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 ABALON-201ENST00000629058 1903 ntBASIC18■□□□□ 0.47
VARSP26640 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18■□□□□ 0.47
VARSP26640 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 AC092338.2-201ENST00000568827 1415 ntBASIC18■□□□□ 0.47
VARSP26640 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18■□□□□ 0.47
VARSP26640 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 TSPY17P-201ENST00000450329 467 ntBASIC18■□□□□ 0.47
VARSP26640 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18■□□□□ 0.47
VARSP26640 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18■□□□□ 0.47
VARSP26640 AL353719.1-201ENST00000566847 864 ntBASIC18■□□□□ 0.47
VARSP26640 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
VARSP26640 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18■□□□□ 0.47
VARSP26640 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VARSP26640 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 BCL2-203ENST00000589955 5011 ntBASIC17.99■□□□□ 0.47
VARSP26640 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
VARSP26640 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
VARSP26640 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.99■□□□□ 0.47
VARSP26640 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
VARSP26640 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
VARSP26640 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.99■□□□□ 0.47
VARSP26640 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.99■□□□□ 0.47
VARSP26640 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.99■□□□□ 0.47
VARSP26640 AC091076.1-201ENST00000610741 619 ntBASIC17.99■□□□□ 0.47
VARSP26640 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VARSP26640 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms