Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.48■□□□□ 0.55
XPAP23025 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.48■□□□□ 0.55
XPAP23025 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
XPAP23025 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
XPAP23025 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
XPAP23025 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
XPAP23025 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.48■□□□□ 0.55
XPAP23025 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
XPAP23025 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.48■□□□□ 0.55
XPAP23025 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
XPAP23025 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
XPAP23025 AC093525.10-201ENST00000625130 1569 ntBASIC18.47■□□□□ 0.55
XPAP23025 AL499627.1-201ENST00000569373 2188 ntBASIC18.47■□□□□ 0.55
XPAP23025 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
XPAP23025 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
XPAP23025 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
XPAP23025 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.47■□□□□ 0.55
XPAP23025 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
XPAP23025 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
XPAP23025 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.47■□□□□ 0.55
XPAP23025 KRT18P48-201ENST00000434763 852 ntBASIC18.47■□□□□ 0.55
XPAP23025 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.47■□□□□ 0.55
XPAP23025 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.47■□□□□ 0.55
XPAP23025 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.47■□□□□ 0.55
XPAP23025 AC093458.2-201ENST00000623150 629 ntBASIC18.47■□□□□ 0.55
XPAP23025 AC116407.4-201ENST00000623319 1061 ntBASIC18.47■□□□□ 0.55
XPAP23025 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.47■□□□□ 0.55
XPAP23025 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.47■□□□□ 0.55
XPAP23025 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
XPAP23025 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
XPAP23025 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
XPAP23025 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
XPAP23025 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.47■□□□□ 0.55
XPAP23025 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
XPAP23025 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
XPAP23025 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
XPAP23025 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.47■□□□□ 0.55
XPAP23025 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
XPAP23025 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
XPAP23025 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
XPAP23025 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.46■□□□□ 0.55
XPAP23025 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
XPAP23025 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.46■□□□□ 0.55
XPAP23025 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
XPAP23025 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.46■□□□□ 0.55
XPAP23025 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.46■□□□□ 0.55
XPAP23025 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.46■□□□□ 0.55
XPAP23025 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.46■□□□□ 0.55
XPAP23025 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
XPAP23025 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
XPAP23025 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.46■□□□□ 0.55
XPAP23025 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
XPAP23025 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
XPAP23025 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
XPAP23025 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
XPAP23025 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
XPAP23025 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.45■□□□□ 0.54
XPAP23025 AC018445.3-201ENST00000624177 1945 ntBASIC18.45■□□□□ 0.54
XPAP23025 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
XPAP23025 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
XPAP23025 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
XPAP23025 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
XPAP23025 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
XPAP23025 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
XPAP23025 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.45■□□□□ 0.54
XPAP23025 SPDYE13P-201ENST00000445314 798 ntBASIC18.45■□□□□ 0.54
XPAP23025 AP003733.1-201ENST00000491725 852 ntBASIC18.45■□□□□ 0.54
XPAP23025 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
XPAP23025 AC024563.2-201ENST00000603282 481 ntBASIC18.45■□□□□ 0.54
XPAP23025 AC069148.1-201ENST00000608741 768 ntBASIC18.45■□□□□ 0.54
XPAP23025 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.45■□□□□ 0.54
XPAP23025 AL162741.1-201ENST00000565563 1558 ntBASIC18.45■□□□□ 0.54
XPAP23025 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
XPAP23025 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.45■□□□□ 0.54
XPAP23025 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
XPAP23025 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
XPAP23025 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
XPAP23025 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
XPAP23025 AC099343.3-201ENST00000605834 2503 ntBASIC18.45■□□□□ 0.54
XPAP23025 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
XPAP23025 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
XPAP23025 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.44■□□□□ 0.54
XPAP23025 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
XPAP23025 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.44■□□□□ 0.54
XPAP23025 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.44■□□□□ 0.54
XPAP23025 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms