Protein–RNA interactions for Protein: P18428

LBP, Lipopolysaccharide-binding protein, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBPP18428 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBPP18428 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBPP18428 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LBPP18428 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBPP18428 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBPP18428 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBPP18428 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LBPP18428 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LBPP18428 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.71■□□□□ 0.43
LBPP18428 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.71■□□□□ 0.43
LBPP18428 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LBPP18428 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 AC128676.1-201ENST00000454392 318 ntBASIC17.71■□□□□ 0.43
LBPP18428 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.71■□□□□ 0.43
LBPP18428 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.71■□□□□ 0.43
LBPP18428 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LBPP18428 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.71■□□□□ 0.43
LBPP18428 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LBPP18428 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.71■□□□□ 0.43
LBPP18428 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LBPP18428 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LBPP18428 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
LBPP18428 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LBPP18428 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LBPP18428 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LBPP18428 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LBPP18428 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LBPP18428 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.7■□□□□ 0.42
LBPP18428 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.7■□□□□ 0.42
LBPP18428 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LBPP18428 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LBPP18428 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.7■□□□□ 0.42
LBPP18428 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LBPP18428 MESTP1-201ENST00000404287 994 ntBASIC17.7■□□□□ 0.42
LBPP18428 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.7■□□□□ 0.42
LBPP18428 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.7■□□□□ 0.42
LBPP18428 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.7■□□□□ 0.42
LBPP18428 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.7■□□□□ 0.42
LBPP18428 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.7■□□□□ 0.42
LBPP18428 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LBPP18428 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LBPP18428 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.7■□□□□ 0.42
LBPP18428 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.7■□□□□ 0.42
LBPP18428 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LBPP18428 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.7■□□□□ 0.42
LBPP18428 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LBPP18428 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.7■□□□□ 0.42
LBPP18428 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.7■□□□□ 0.42
LBPP18428 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 AC096733.2-201ENST00000609937 1394 ntBASIC17.69■□□□□ 0.42
LBPP18428 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.69■□□□□ 0.42
LBPP18428 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.69■□□□□ 0.42
LBPP18428 RPPH1-201ENST00000516869 333 ntBASIC17.69■□□□□ 0.42
LBPP18428 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.69■□□□□ 0.42
LBPP18428 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LBPP18428 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LBPP18428 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.69■□□□□ 0.42
LBPP18428 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LBPP18428 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.68■□□□□ 0.42
LBPP18428 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.68■□□□□ 0.42
LBPP18428 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LBPP18428 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.68■□□□□ 0.42
LBPP18428 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LBPP18428 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.68■□□□□ 0.42
LBPP18428 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LBPP18428 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LBPP18428 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LBPP18428 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.68■□□□□ 0.42
LBPP18428 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms