Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.96■□□□□ 0.31
PRKCAP17252 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRKCAP17252 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.96■□□□□ 0.31
PRKCAP17252 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.96■□□□□ 0.31
PRKCAP17252 AC012306.2-201ENST00000609350 630 ntBASIC16.96■□□□□ 0.31
PRKCAP17252 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.96■□□□□ 0.31
PRKCAP17252 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.96■□□□□ 0.31
PRKCAP17252 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRKCAP17252 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PRKCAP17252 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRKCAP17252 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.96■□□□□ 0.31
PRKCAP17252 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRKCAP17252 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRKCAP17252 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
PRKCAP17252 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRKCAP17252 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRKCAP17252 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRKCAP17252 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRKCAP17252 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.96■□□□□ 0.3
PRKCAP17252 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.96■□□□□ 0.3
PRKCAP17252 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.96■□□□□ 0.3
PRKCAP17252 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.96■□□□□ 0.3
PRKCAP17252 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.96■□□□□ 0.3
PRKCAP17252 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRKCAP17252 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.95■□□□□ 0.3
PRKCAP17252 WIZP1-201ENST00000531444 2299 ntBASIC16.95■□□□□ 0.3
PRKCAP17252 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PRKCAP17252 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.95■□□□□ 0.3
PRKCAP17252 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.95■□□□□ 0.3
PRKCAP17252 AC036111.1-201ENST00000533973 1582 ntBASIC16.95■□□□□ 0.3
PRKCAP17252 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.95■□□□□ 0.3
PRKCAP17252 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.95■□□□□ 0.3
PRKCAP17252 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 MIR564-202ENST00000385049 94 ntBASIC16.95■□□□□ 0.3
PRKCAP17252 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PRKCAP17252 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.95■□□□□ 0.3
PRKCAP17252 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.95■□□□□ 0.3
PRKCAP17252 CR769767.2-201ENST00000622735 460 ntBASIC16.95■□□□□ 0.3
PRKCAP17252 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PRKCAP17252 AC097493.4-201ENST00000641197 219 ntBASIC16.95■□□□□ 0.3
PRKCAP17252 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PRKCAP17252 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
PRKCAP17252 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.95■□□□□ 0.3
PRKCAP17252 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.95■□□□□ 0.3
PRKCAP17252 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRKCAP17252 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.94■□□□□ 0.3
PRKCAP17252 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.94■□□□□ 0.3
PRKCAP17252 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.94■□□□□ 0.3
PRKCAP17252 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.94■□□□□ 0.3
PRKCAP17252 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.94■□□□□ 0.3
PRKCAP17252 WWOX-216ENST00000569818 525 ntBASIC16.94■□□□□ 0.3
PRKCAP17252 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.94■□□□□ 0.3
PRKCAP17252 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.94■□□□□ 0.3
PRKCAP17252 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PRKCAP17252 AC046158.3-201ENST00000624947 2558 ntBASIC16.94■□□□□ 0.3
PRKCAP17252 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.94■□□□□ 0.3
PRKCAP17252 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 KRT8P45-201ENST00000414328 1447 ntBASIC16.94■□□□□ 0.3
PRKCAP17252 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms