Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 AL096828.2-201ENST00000567259 1965 ntBASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 AC009065.1-201ENST00000564055 1225 ntBASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 AC116562.4-202ENST00000641738 218 ntBASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 AC005332.8-201ENST00000622750 2735 ntBASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
HNRNPCL4P0DMR1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 PHGDH-209ENST00000641074 1780 ntBASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 TSPY7P-201ENST00000431358 1114 ntBASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HNRNPCL4P0DMR1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HNRNPCL4P0DMR1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.02■□□□□ 0.31
HNRNPCL4P0DMR1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HNRNPCL4P0DMR1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.02■□□□□ 0.31
HNRNPCL4P0DMR1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HNRNPCL4P0DMR1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HNRNPCL4P0DMR1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HNRNPCL4P0DMR1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HNRNPCL4P0DMR1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
HNRNPCL4P0DMR1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 KRT17P2-201ENST00000300992 1314 ntBASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 PCDHB18P-201ENST00000524813 2368 ntBASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.01■□□□□ 0.31
HNRNPCL4P0DMR1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms