Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 MIR1224-201ENST00000408193 85 ntBASIC14.16□□□□□ -0.14
TRBV12-3P01733 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 AC009065.1-201ENST00000564055 1225 ntBASIC14.16□□□□□ -0.14
TRBV12-3P01733 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV12-3P01733 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
TRBV12-3P01733 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 AL136038.4-201ENST00000603606 1261 ntBASIC14.15□□□□□ -0.14
TRBV12-3P01733 AC010331.1-201ENST00000611423 582 ntBASIC14.15□□□□□ -0.14
TRBV12-3P01733 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 HYMAI.1-201ENST00000620949 238 ntBASIC14.15□□□□□ -0.14
TRBV12-3P01733 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 AC135776.1-201ENST00000319817 2481 ntBASIC14.15□□□□□ -0.14
TRBV12-3P01733 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV12-3P01733 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRBV12-3P01733 AL391807.1-203ENST00000604392 2365 ntBASIC14.15□□□□□ -0.14
TRBV12-3P01733 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TRBV12-3P01733 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV12-3P01733 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV12-3P01733 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV12-3P01733 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRBV12-3P01733 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.14□□□□□ -0.15
TRBV12-3P01733 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRBV12-3P01733 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRBV12-3P01733 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV12-3P01733 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV12-3P01733 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV12-3P01733 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV12-3P01733 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms