Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.54■□□□□ 0.88
GGPS1O95749 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GGPS1O95749 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
GGPS1O95749 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
GGPS1O95749 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GGPS1O95749 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.54■□□□□ 0.88
GGPS1O95749 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GGPS1O95749 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.54■□□□□ 0.88
GGPS1O95749 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.53■□□□□ 0.88
GGPS1O95749 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.53■□□□□ 0.88
GGPS1O95749 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GGPS1O95749 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GGPS1O95749 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.53■□□□□ 0.88
GGPS1O95749 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.53■□□□□ 0.88
GGPS1O95749 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.53■□□□□ 0.88
GGPS1O95749 FAAHP1-202ENST00000446499 1238 ntBASIC20.53■□□□□ 0.88
GGPS1O95749 VENTXP7-201ENST00000475503 772 ntBASIC20.53■□□□□ 0.88
GGPS1O95749 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.53■□□□□ 0.88
GGPS1O95749 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.53■□□□□ 0.88
GGPS1O95749 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GGPS1O95749 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
GGPS1O95749 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.53■□□□□ 0.88
GGPS1O95749 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GGPS1O95749 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GGPS1O95749 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GGPS1O95749 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GGPS1O95749 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.52■□□□□ 0.88
GGPS1O95749 AC011840.4-201ENST00000578471 627 ntBASIC20.52■□□□□ 0.88
GGPS1O95749 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.52■□□□□ 0.88
GGPS1O95749 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.52■□□□□ 0.88
GGPS1O95749 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GGPS1O95749 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GGPS1O95749 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GGPS1O95749 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
GGPS1O95749 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GGPS1O95749 NSUN5P1-202ENST00000421140 1535 ntBASIC20.52■□□□□ 0.87
GGPS1O95749 NSUN5P2-203ENST00000457352 1529 ntBASIC20.52■□□□□ 0.87
GGPS1O95749 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.52■□□□□ 0.87
GGPS1O95749 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
GGPS1O95749 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GGPS1O95749 AL024508.2-201ENST00000607749 1894 ntBASIC20.52■□□□□ 0.87
GGPS1O95749 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
GGPS1O95749 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GGPS1O95749 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GGPS1O95749 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GGPS1O95749 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
GGPS1O95749 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GGPS1O95749 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
GGPS1O95749 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GGPS1O95749 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GGPS1O95749 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
GGPS1O95749 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
GGPS1O95749 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.51■□□□□ 0.87
GGPS1O95749 AC113404.2-201ENST00000507884 177 ntBASIC20.51■□□□□ 0.87
GGPS1O95749 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.51■□□□□ 0.87
GGPS1O95749 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.51■□□□□ 0.87
GGPS1O95749 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.51■□□□□ 0.87
GGPS1O95749 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.51■□□□□ 0.87
GGPS1O95749 AC008687.5-201ENST00000593746 558 ntBASIC20.51■□□□□ 0.87
GGPS1O95749 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.51■□□□□ 0.87
GGPS1O95749 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GGPS1O95749 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.51■□□□□ 0.87
GGPS1O95749 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.51■□□□□ 0.87
GGPS1O95749 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
GGPS1O95749 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GGPS1O95749 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GGPS1O95749 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
GGPS1O95749 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.51■□□□□ 0.87
GGPS1O95749 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GGPS1O95749 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
GGPS1O95749 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GGPS1O95749 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GGPS1O95749 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
GGPS1O95749 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GGPS1O95749 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.5■□□□□ 0.87
GGPS1O95749 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.5■□□□□ 0.87
GGPS1O95749 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GGPS1O95749 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GGPS1O95749 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
GGPS1O95749 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GGPS1O95749 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
GGPS1O95749 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.5■□□□□ 0.87
GGPS1O95749 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GGPS1O95749 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.5■□□□□ 0.87
GGPS1O95749 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms