Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
TRIM3O75382 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM3O75382 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM3O75382 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM3O75382 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM3O75382 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM3O75382 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM3O75382 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRIM3O75382 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM3O75382 PRORSD1P-202ENST00000563365 2154 ntBASIC17.09■□□□□ 0.33
TRIM3O75382 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
TRIM3O75382 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM3O75382 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM3O75382 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRIM3O75382 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM3O75382 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM3O75382 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM3O75382 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
TRIM3O75382 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM3O75382 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM3O75382 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM3O75382 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM3O75382 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TRIM3O75382 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM3O75382 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.08■□□□□ 0.33
TRIM3O75382 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TRIM3O75382 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.08■□□□□ 0.33
TRIM3O75382 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM3O75382 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM3O75382 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM3O75382 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRIM3O75382 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM3O75382 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM3O75382 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM3O75382 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM3O75382 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM3O75382 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM3O75382 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM3O75382 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.08■□□□□ 0.32
TRIM3O75382 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM3O75382 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM3O75382 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM3O75382 LINC01238-205ENST00000567549 1107 ntBASIC17.08■□□□□ 0.32
TRIM3O75382 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM3O75382 NTF6B-201ENST00000591913 560 ntBASIC17.08■□□□□ 0.32
TRIM3O75382 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM3O75382 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM3O75382 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM3O75382 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM3O75382 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM3O75382 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM3O75382 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM3O75382 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM3O75382 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM3O75382 OR6D1P-202ENST00000641007 5290 ntBASIC17.07■□□□□ 0.32
TRIM3O75382 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM3O75382 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM3O75382 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM3O75382 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM3O75382 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRIM3O75382 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM3O75382 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM3O75382 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM3O75382 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM3O75382 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM3O75382 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM3O75382 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM3O75382 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM3O75382 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM3O75382 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM3O75382 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM3O75382 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM3O75382 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM3O75382 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM3O75382 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRIM3O75382 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM3O75382 AC008556.1-201ENST00000610908 2040 ntBASIC17.07■□□□□ 0.32
TRIM3O75382 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM3O75382 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM3O75382 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM3O75382 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM3O75382 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TRIM3O75382 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM3O75382 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM3O75382 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM3O75382 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM3O75382 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM3O75382 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM3O75382 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM3O75382 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM3O75382 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM3O75382 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM3O75382 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM3O75382 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms