Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF40O75150 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RNF40O75150 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF40O75150 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF40O75150 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RNF40O75150 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 RNF152P1-201ENST00000397754 604 ntBASIC19.76■□□□□ 0.75
RNF40O75150 FAM8A6P-201ENST00000407496 1135 ntBASIC19.76■□□□□ 0.75
RNF40O75150 AC007663.1-201ENST00000438948 1240 ntBASIC19.76■□□□□ 0.75
RNF40O75150 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.76■□□□□ 0.75
RNF40O75150 YBX1P2-201ENST00000489612 999 ntBASIC19.76■□□□□ 0.75
RNF40O75150 Z85996.1-201ENST00000494644 937 ntBASIC19.76■□□□□ 0.75
RNF40O75150 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RNF40O75150 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF40O75150 AC091076.1-201ENST00000610741 619 ntBASIC19.76■□□□□ 0.75
RNF40O75150 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 ESPNP-201ENST00000270691 2015 ntBASIC19.76■□□□□ 0.75
RNF40O75150 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF40O75150 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF40O75150 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF40O75150 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RNF40O75150 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RNF40O75150 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF40O75150 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF40O75150 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF40O75150 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RNF40O75150 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RNF40O75150 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RNF40O75150 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF40O75150 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF40O75150 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF40O75150 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF40O75150 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF40O75150 AC010653.2-201ENST00000623505 997 ntBASIC19.75■□□□□ 0.75
RNF40O75150 MYC-208ENST00000641036 567 ntBASIC19.75■□□□□ 0.75
RNF40O75150 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF40O75150 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF40O75150 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF40O75150 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
RNF40O75150 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF40O75150 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF40O75150 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF40O75150 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RNF40O75150 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
RNF40O75150 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF40O75150 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RNF40O75150 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RNF40O75150 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF40O75150 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RNF40O75150 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF40O75150 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF40O75150 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF40O75150 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF40O75150 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF40O75150 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF40O75150 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF40O75150 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF40O75150 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.74■□□□□ 0.75
RNF40O75150 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
RNF40O75150 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF40O75150 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF40O75150 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF40O75150 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF40O75150 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF40O75150 KRT8P8-201ENST00000434750 1448 ntBASIC19.74■□□□□ 0.75
RNF40O75150 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF40O75150 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RNF40O75150 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF40O75150 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RNF40O75150 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF40O75150 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF40O75150 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF40O75150 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF40O75150 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RNF40O75150 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RNF40O75150 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF40O75150 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RNF40O75150 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.73■□□□□ 0.75
RNF40O75150 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF40O75150 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms