Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL163051.1-201ENST00000569214 1512 ntBASIC17.4■□□□□ 0.38
SCN2BO60939 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.4■□□□□ 0.38
SCN2BO60939 AC134043.2-201ENST00000624206 2238 ntBASIC17.4■□□□□ 0.38
SCN2BO60939 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.4■□□□□ 0.38
SCN2BO60939 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.4■□□□□ 0.38
SCN2BO60939 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.4■□□□□ 0.38
SCN2BO60939 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SCN2BO60939 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SCN2BO60939 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SCN2BO60939 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SCN2BO60939 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SCN2BO60939 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SCN2BO60939 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.39■□□□□ 0.38
SCN2BO60939 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.39■□□□□ 0.37
SCN2BO60939 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
SCN2BO60939 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SCN2BO60939 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCN2BO60939 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN2BO60939 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCN2BO60939 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.39■□□□□ 0.37
SCN2BO60939 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN2BO60939 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.39■□□□□ 0.37
SCN2BO60939 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.39■□□□□ 0.37
SCN2BO60939 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.39■□□□□ 0.37
SCN2BO60939 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCN2BO60939 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SCN2BO60939 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.39■□□□□ 0.37
SCN2BO60939 AC026471.5-201ENST00000615068 467 ntBASIC17.39■□□□□ 0.37
SCN2BO60939 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.39■□□□□ 0.37
SCN2BO60939 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SCN2BO60939 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN2BO60939 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN2BO60939 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN2BO60939 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SCN2BO60939 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.39■□□□□ 0.37
SCN2BO60939 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN2BO60939 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SCN2BO60939 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCN2BO60939 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCN2BO60939 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCN2BO60939 HOXB1-202ENST00000577092 1414 ntBASIC17.38■□□□□ 0.37
SCN2BO60939 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.38■□□□□ 0.37
SCN2BO60939 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.38■□□□□ 0.37
SCN2BO60939 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCN2BO60939 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCN2BO60939 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.38■□□□□ 0.37
SCN2BO60939 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SCN2BO60939 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.38■□□□□ 0.37
SCN2BO60939 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.38■□□□□ 0.37
SCN2BO60939 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.38■□□□□ 0.37
SCN2BO60939 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.38■□□□□ 0.37
SCN2BO60939 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.38■□□□□ 0.37
SCN2BO60939 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.38■□□□□ 0.37
SCN2BO60939 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.38■□□□□ 0.37
SCN2BO60939 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SCN2BO60939 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.38■□□□□ 0.37
SCN2BO60939 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.38■□□□□ 0.37
SCN2BO60939 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN2BO60939 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN2BO60939 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN2BO60939 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCN2BO60939 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCN2BO60939 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SCN2BO60939 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN2BO60939 AL355355.2-201ENST00000442321 338 ntBASIC17.37■□□□□ 0.37
SCN2BO60939 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCN2BO60939 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.37■□□□□ 0.37
SCN2BO60939 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.37■□□□□ 0.37
SCN2BO60939 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.37■□□□□ 0.37
SCN2BO60939 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.37■□□□□ 0.37
SCN2BO60939 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCN2BO60939 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCN2BO60939 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.37■□□□□ 0.37
SCN2BO60939 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN2BO60939 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SCN2BO60939 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
SCN2BO60939 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.37■□□□□ 0.37
SCN2BO60939 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN2BO60939 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms