Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 OR6D1P-202ENST00000641007 5290 ntBASIC18.06■□□□□ 0.48
SNX3O60493 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.06■□□□□ 0.48
SNX3O60493 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNX3O60493 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX3O60493 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX3O60493 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SNX3O60493 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX3O60493 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX3O60493 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SNX3O60493 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX3O60493 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
SNX3O60493 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SNX3O60493 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX3O60493 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 AC105020.1-201ENST00000435356 2205 ntBASIC18.05■□□□□ 0.48
SNX3O60493 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX3O60493 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
SNX3O60493 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SNX3O60493 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.05■□□□□ 0.48
SNX3O60493 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.05■□□□□ 0.48
SNX3O60493 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.05■□□□□ 0.48
SNX3O60493 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
SNX3O60493 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SNX3O60493 AL121829.2-201ENST00000620908 328 ntBASIC18.05■□□□□ 0.48
SNX3O60493 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SNX3O60493 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SNX3O60493 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX3O60493 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.05■□□□□ 0.48
SNX3O60493 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
SNX3O60493 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SNX3O60493 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SNX3O60493 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX3O60493 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX3O60493 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX3O60493 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.04■□□□□ 0.48
SNX3O60493 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNX3O60493 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX3O60493 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SNX3O60493 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.04■□□□□ 0.48
SNX3O60493 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
SNX3O60493 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX3O60493 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.04■□□□□ 0.48
SNX3O60493 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX3O60493 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
SNX3O60493 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SNX3O60493 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SNX3O60493 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNX3O60493 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX3O60493 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX3O60493 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNX3O60493 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SNX3O60493 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNX3O60493 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX3O60493 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX3O60493 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.04■□□□□ 0.48
SNX3O60493 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX3O60493 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNX3O60493 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX3O60493 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
SNX3O60493 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
SNX3O60493 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX3O60493 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX3O60493 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX3O60493 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SNX3O60493 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SNX3O60493 AGGF1P2-201ENST00000426656 2106 ntBASIC18.03■□□□□ 0.48
SNX3O60493 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX3O60493 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SNX3O60493 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.03■□□□□ 0.48
SNX3O60493 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX3O60493 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX3O60493 AC092437.1-201ENST00000624794 1048 ntBASIC18.03■□□□□ 0.48
SNX3O60493 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX3O60493 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX3O60493 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SNX3O60493 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SNX3O60493 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX3O60493 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX3O60493 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX3O60493 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.02■□□□□ 0.48
SNX3O60493 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX3O60493 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX3O60493 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX3O60493 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms