Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
KDELR3O43731 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
KDELR3O43731 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.55■□□□□ 0.56
KDELR3O43731 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
KDELR3O43731 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KDELR3O43731 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.55■□□□□ 0.56
KDELR3O43731 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
KDELR3O43731 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.55■□□□□ 0.56
KDELR3O43731 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KDELR3O43731 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KDELR3O43731 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.55■□□□□ 0.56
KDELR3O43731 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KDELR3O43731 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
KDELR3O43731 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KDELR3O43731 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KDELR3O43731 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.55■□□□□ 0.56
KDELR3O43731 TSPY22P-201ENST00000427496 604 ntBASIC18.55■□□□□ 0.56
KDELR3O43731 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KDELR3O43731 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
KDELR3O43731 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.55■□□□□ 0.56
KDELR3O43731 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.55■□□□□ 0.56
KDELR3O43731 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.55■□□□□ 0.56
KDELR3O43731 AC004263.2-201ENST00000617183 678 ntBASIC18.55■□□□□ 0.56
KDELR3O43731 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.55■□□□□ 0.56
KDELR3O43731 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.55■□□□□ 0.56
KDELR3O43731 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.55■□□□□ 0.56
KDELR3O43731 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.55■□□□□ 0.56
KDELR3O43731 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.55■□□□□ 0.56
KDELR3O43731 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.55■□□□□ 0.56
KDELR3O43731 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
KDELR3O43731 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.55■□□□□ 0.56
KDELR3O43731 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KDELR3O43731 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KDELR3O43731 PHGDH-209ENST00000641074 1780 ntBASIC18.55■□□□□ 0.56
KDELR3O43731 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KDELR3O43731 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KDELR3O43731 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KDELR3O43731 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 AC093677.2-201ENST00000600169 1863 ntBASIC18.54■□□□□ 0.56
KDELR3O43731 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
KDELR3O43731 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 KRT8P26-201ENST00000534154 1276 ntBASIC18.54■□□□□ 0.56
KDELR3O43731 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.54■□□□□ 0.56
KDELR3O43731 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
KDELR3O43731 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.54■□□□□ 0.56
KDELR3O43731 AL353692.3-201ENST00000407031 1396 ntBASIC18.54■□□□□ 0.56
KDELR3O43731 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.54■□□□□ 0.56
KDELR3O43731 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
KDELR3O43731 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KDELR3O43731 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDELR3O43731 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDELR3O43731 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDELR3O43731 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.53■□□□□ 0.56
KDELR3O43731 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDELR3O43731 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDELR3O43731 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
KDELR3O43731 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
KDELR3O43731 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDELR3O43731 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KDELR3O43731 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.53■□□□□ 0.56
KDELR3O43731 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
KDELR3O43731 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
KDELR3O43731 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
KDELR3O43731 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.53■□□□□ 0.56
KDELR3O43731 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
KDELR3O43731 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.53■□□□□ 0.56
KDELR3O43731 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDELR3O43731 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
KDELR3O43731 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
KDELR3O43731 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.53■□□□□ 0.56
KDELR3O43731 AC135776.1-201ENST00000319817 2481 ntBASIC18.52■□□□□ 0.56
KDELR3O43731 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
KDELR3O43731 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.52■□□□□ 0.56
KDELR3O43731 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KDELR3O43731 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KDELR3O43731 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
KDELR3O43731 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.52■□□□□ 0.56
KDELR3O43731 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.52■□□□□ 0.56
KDELR3O43731 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KDELR3O43731 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms