Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH17O14917 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH17O14917 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDH17O14917 AC112497.1-201ENST00000624824 639 ntBASIC17.51■□□□□ 0.39
PCDH17O14917 AL358472.4-201ENST00000633140 710 ntBASIC17.51■□□□□ 0.39
PCDH17O14917 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH17O14917 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH17O14917 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH17O14917 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH17O14917 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH17O14917 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDH17O14917 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDH17O14917 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDH17O14917 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 AC036111.1-201ENST00000533973 1582 ntBASIC17.5■□□□□ 0.39
PCDH17O14917 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH17O14917 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PCDH17O14917 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 UPK3BP1-201ENST00000428678 509 ntBASIC17.5■□□□□ 0.39
PCDH17O14917 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH17O14917 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDH17O14917 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDH17O14917 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDH17O14917 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDH17O14917 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH17O14917 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 MIR3180-4-201ENST00000582223 153 ntBASIC17.5■□□□□ 0.39
PCDH17O14917 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDH17O14917 AC083906.6-201ENST00000641366 219 ntBASIC17.5■□□□□ 0.39
PCDH17O14917 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH17O14917 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 RCC2P3-201ENST00000418112 1537 ntBASIC17.5■□□□□ 0.39
PCDH17O14917 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDH17O14917 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDH17O14917 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDH17O14917 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH17O14917 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH17O14917 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH17O14917 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH17O14917 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH17O14917 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH17O14917 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH17O14917 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH17O14917 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDH17O14917 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDH17O14917 AL359075.1-203ENST00000462729 1002 ntBASIC17.49■□□□□ 0.39
PCDH17O14917 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDH17O14917 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDH17O14917 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH17O14917 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH17O14917 AP000550.4-202ENST00000639755 178 ntBASIC17.49■□□□□ 0.39
PCDH17O14917 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDH17O14917 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH17O14917 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH17O14917 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH17O14917 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH17O14917 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH17O14917 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDH17O14917 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDH17O14917 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH17O14917 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 PCDHB18P-201ENST00000524813 2368 ntBASIC17.48■□□□□ 0.39
PCDH17O14917 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDH17O14917 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
PCDH17O14917 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDH17O14917 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH17O14917 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDH17O14917 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms