Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
UBFD1O14562 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBFD1O14562 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
UBFD1O14562 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBFD1O14562 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UBFD1O14562 AC006116.8-202ENST00000587620 1550 ntBASIC17.79■□□□□ 0.44
UBFD1O14562 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
UBFD1O14562 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
UBFD1O14562 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
UBFD1O14562 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.78■□□□□ 0.44
UBFD1O14562 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.78■□□□□ 0.44
UBFD1O14562 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
UBFD1O14562 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.78■□□□□ 0.44
UBFD1O14562 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.78■□□□□ 0.44
UBFD1O14562 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.78■□□□□ 0.44
UBFD1O14562 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.78■□□□□ 0.44
UBFD1O14562 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 AP001412.1-201ENST00000608405 714 ntBASIC17.78■□□□□ 0.44
UBFD1O14562 CR769767.2-201ENST00000622735 460 ntBASIC17.78■□□□□ 0.44
UBFD1O14562 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.78■□□□□ 0.44
UBFD1O14562 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.78■□□□□ 0.44
UBFD1O14562 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
UBFD1O14562 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.78■□□□□ 0.44
UBFD1O14562 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBFD1O14562 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.77■□□□□ 0.44
UBFD1O14562 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBFD1O14562 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.77■□□□□ 0.44
UBFD1O14562 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBFD1O14562 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBFD1O14562 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBFD1O14562 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBFD1O14562 AC093010.1-201ENST00000473625 1624 ntBASIC17.77■□□□□ 0.44
UBFD1O14562 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.77■□□□□ 0.44
UBFD1O14562 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBFD1O14562 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBFD1O14562 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBFD1O14562 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBFD1O14562 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
UBFD1O14562 KRT18P23-201ENST00000435622 1283 ntBASIC17.77■□□□□ 0.44
UBFD1O14562 AP003071.4-201ENST00000562276 1284 ntBASIC17.77■□□□□ 0.44
UBFD1O14562 AL353719.1-201ENST00000566847 864 ntBASIC17.77■□□□□ 0.44
UBFD1O14562 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
UBFD1O14562 AC066615.1-201ENST00000640911 628 ntBASIC17.77■□□□□ 0.44
UBFD1O14562 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBFD1O14562 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UBFD1O14562 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBFD1O14562 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
UBFD1O14562 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBFD1O14562 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBFD1O14562 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
UBFD1O14562 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBFD1O14562 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.76■□□□□ 0.43
UBFD1O14562 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBFD1O14562 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.76■□□□□ 0.43
UBFD1O14562 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBFD1O14562 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBFD1O14562 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBFD1O14562 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBFD1O14562 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBFD1O14562 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBFD1O14562 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.76■□□□□ 0.43
UBFD1O14562 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBFD1O14562 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBFD1O14562 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.76■□□□□ 0.43
UBFD1O14562 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.76■□□□□ 0.43
UBFD1O14562 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.76■□□□□ 0.43
UBFD1O14562 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBFD1O14562 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.76■□□□□ 0.43
UBFD1O14562 AIRN-201ENST00000601203 4374 ntBASIC17.76■□□□□ 0.43
UBFD1O14562 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
UBFD1O14562 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBFD1O14562 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBFD1O14562 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBFD1O14562 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UBFD1O14562 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBFD1O14562 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
UBFD1O14562 PP12613-201ENST00000424958 2230 ntBASIC17.75■□□□□ 0.43
UBFD1O14562 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UBFD1O14562 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBFD1O14562 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.75■□□□□ 0.43
UBFD1O14562 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBFD1O14562 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
UBFD1O14562 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBFD1O14562 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
UBFD1O14562 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBFD1O14562 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms