Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.47■□□□□ 0.39
PDLIM1O00151 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.47■□□□□ 0.39
PDLIM1O00151 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
PDLIM1O00151 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PDLIM1O00151 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PDLIM1O00151 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.47■□□□□ 0.39
PDLIM1O00151 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.47■□□□□ 0.39
PDLIM1O00151 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.47■□□□□ 0.39
PDLIM1O00151 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDLIM1O00151 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PDLIM1O00151 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.47■□□□□ 0.39
PDLIM1O00151 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.47■□□□□ 0.39
PDLIM1O00151 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PDLIM1O00151 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 AC138028.4-201ENST00000564984 1845 ntBASIC17.47■□□□□ 0.39
PDLIM1O00151 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDLIM1O00151 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PDLIM1O00151 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM1O00151 AP006587.1-201ENST00000534129 1502 ntBASIC17.47■□□□□ 0.39
PDLIM1O00151 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.46■□□□□ 0.39
PDLIM1O00151 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.46■□□□□ 0.39
PDLIM1O00151 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PDLIM1O00151 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PDLIM1O00151 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.46■□□□□ 0.39
PDLIM1O00151 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM1O00151 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.46■□□□□ 0.39
PDLIM1O00151 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM1O00151 YBX1P10-201ENST00000444752 975 ntBASIC17.46■□□□□ 0.39
PDLIM1O00151 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.46■□□□□ 0.39
PDLIM1O00151 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
PDLIM1O00151 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.46■□□□□ 0.39
PDLIM1O00151 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.46■□□□□ 0.39
PDLIM1O00151 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PDLIM1O00151 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.46■□□□□ 0.39
PDLIM1O00151 AL121906.2-201ENST00000621597 723 ntBASIC17.46■□□□□ 0.39
PDLIM1O00151 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.46■□□□□ 0.39
PDLIM1O00151 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PDLIM1O00151 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM1O00151 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM1O00151 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.46■□□□□ 0.39
PDLIM1O00151 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM1O00151 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PDLIM1O00151 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM1O00151 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.46■□□□□ 0.38
PDLIM1O00151 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PDLIM1O00151 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
PDLIM1O00151 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PDLIM1O00151 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.45■□□□□ 0.38
PDLIM1O00151 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.45■□□□□ 0.38
PDLIM1O00151 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
PDLIM1O00151 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.45■□□□□ 0.38
PDLIM1O00151 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.45■□□□□ 0.38
PDLIM1O00151 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.45■□□□□ 0.38
PDLIM1O00151 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.45■□□□□ 0.38
PDLIM1O00151 AC093677.2-201ENST00000600169 1863 ntBASIC17.45■□□□□ 0.38
PDLIM1O00151 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM1O00151 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PDLIM1O00151 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PDLIM1O00151 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PDLIM1O00151 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PDLIM1O00151 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms