Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV16A0A0A6YYK6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV16A0A0A6YYK6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV16A0A0A6YYK6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV16A0A0A6YYK6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV16A0A0A6YYK6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAV16A0A0A6YYK6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV16A0A0A6YYK6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRAV16A0A0A6YYK6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 AC239809.2-201ENST00000415381 517 ntBASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 YBX1P10-201ENST00000444752 975 ntBASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 AC069544.1-201ENST00000609399 999 ntBASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 TFP1-202ENST00000475455 1573 ntBASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV16A0A0A6YYK6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 AL139384.1-201ENST00000612143 3047 ntBASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TRAV16A0A0A6YYK6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms