Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 AL358472.4-201ENST00000633140 710 ntBASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 AC104581.1-202ENST00000635932 2618 ntBASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 SDHAP2-201ENST00000455183 2001 ntBASIC16.69■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 KRT18P38-201ENST00000449496 1282 ntBASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 AC034232.1-201ENST00000506026 1064 ntBASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 AL671277.2-201ENST00000458060 996 ntBASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 AL157888.1-201ENST00000631930 593 ntBASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.66■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.66■□□□□ 0.26
TNFSF12-TNFSF13A0A0A6YY99 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms