Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 AK4P3-201ENST00000418260 669 ntBASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 HOMER2P1-201ENST00000455653 964 ntBASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 AC008687.5-201ENST00000593746 558 ntBASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 REXO1L9P-201ENST00000604264 2108 ntBASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 AL391807.1-203ENST00000604392 2365 ntBASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGC3Q9UN70 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 HLA-F-220ENST00000434407 884 ntBASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 RN7SL850P-201ENST00000579959 291 ntBASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC3Q9UN70 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 AL136038.4-201ENST00000603606 1261 ntBASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC3Q9UN70 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC3Q9UN70 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC3Q9UN70 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC3Q9UN70 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC3Q9UN70 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC3Q9UN70 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms