Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 AC020916.1-201ENST00000587762 1774 ntBASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 AC004951.3-201ENST00000418645 1148 ntBASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.84■□□□□ 0.61
RABGEF1Q9UJ41 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RABGEF1Q9UJ41 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RABGEF1Q9UJ41 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RABGEF1Q9UJ41 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
RABGEF1Q9UJ41 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.83■□□□□ 0.61
RABGEF1Q9UJ41 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RABGEF1Q9UJ41 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RABGEF1Q9UJ41 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 PRSS44-201ENST00000515154 1146 ntBASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 NTF6B-201ENST00000591913 560 ntBASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RABGEF1Q9UJ41 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 LIN28AP1-201ENST00000429574 405 ntBASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 AC091390.4-202ENST00000476426 537 ntBASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 AC008556.1-201ENST00000610908 2040 ntBASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.82■□□□□ 0.6
RABGEF1Q9UJ41 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RABGEF1Q9UJ41 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms