Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 RNF152P1-201ENST00000397754 604 ntBASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 AL441883.1-201ENST00000566170 1045 ntBASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 AK4P3-201ENST00000418260 669 ntBASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 GCSHP2-201ENST00000560971 527 ntBASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 AC024243.1-201ENST00000609234 778 ntBASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PPARGC1AQ9UBK2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 TSPY5P-201ENST00000426936 936 ntBASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPARGC1AQ9UBK2 HTR7P1-202ENST00000624664 4411 ntBASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 AC135050.7-201ENST00000624508 2218 ntBASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 DUX4L26-201ENST00000489078 1255 ntBASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
PPARGC1AQ9UBK2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms