Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 FAM197Y1-201ENST00000421178 764 ntBASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 FEM1AP3-201ENST00000403722 1741 ntBASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 NIFKP9-201ENST00000419265 221 ntBASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 RARRES2P10-201ENST00000564312 460 ntBASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 AC135776.1-201ENST00000319817 2481 ntBASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCF3Q9NUQ8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 AL353807.1-201ENST00000427475 662 ntBASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCF3Q9NUQ8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.65■□□□□ 0.58
ABCF3Q9NUQ8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms