Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AL590326.2-201ENST00000625139 305 ntBASIC16.85■□□□□ 0.29
SDHAF3Q9NRP4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SDHAF3Q9NRP4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SDHAF3Q9NRP4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SDHAF3Q9NRP4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.85■□□□□ 0.29
SDHAF3Q9NRP4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SDHAF3Q9NRP4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SDHAF3Q9NRP4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 AC022616.7-201ENST00000525383 220 ntBASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 AL499627.1-201ENST00000569373 2188 ntBASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SDHAF3Q9NRP4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SDHAF3Q9NRP4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SDHAF3Q9NRP4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.29
SDHAF3Q9NRP4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SDHAF3Q9NRP4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SDHAF3Q9NRP4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
SDHAF3Q9NRP4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 AC008687.5-201ENST00000593746 558 ntBASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 AC073592.3-201ENST00000625118 1834 ntBASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 AL157888.1-201ENST00000631930 593 ntBASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHAF3Q9NRP4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SDHAF3Q9NRP4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms