Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 SLC25A6P5-201ENST00000435663 894 ntBASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 AC099343.3-201ENST00000605834 2503 ntBASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 AP003071.4-201ENST00000562276 1284 ntBASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 Z99916.2-201ENST00000604037 246 ntBASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 AL096828.2-201ENST00000567259 1965 ntBASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 FLJ13224-201ENST00000313737 1514 ntBASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 AL163051.1-201ENST00000569214 1512 ntBASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRTM1Q9HBL6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRTM1Q9HBL6 PHGDH-209ENST00000641074 1780 ntBASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 AC009102.3-201ENST00000623118 1491 ntBASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRTM1Q9HBL6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms