Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 AP003041.3-201ENST00000527151 707 ntBASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 BX088651.1-201ENST00000540551 451 ntBASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 AC036111.1-201ENST00000533973 1582 ntBASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 BICD1-207ENST00000551848 1962 ntBASIC18.41■□□□□ 0.54
CCDC68Q9H2F9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 AL390961.4-201ENST00000623958 2535 ntBASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CCDC68Q9H2F9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC68Q9H2F9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC68Q9H2F9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC68Q9H2F9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 AL162741.1-201ENST00000565563 1558 ntBASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 AL023803.3-201ENST00000615559 522 ntBASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC68Q9H2F9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC68Q9H2F9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms