Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD4Q9H0A8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 AC091390.4-202ENST00000476426 537 ntBASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 FLJ13224-201ENST00000313737 1514 ntBASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.23■□□□□ 0.19
COMMD4Q9H0A8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 AP000593.1-201ENST00000393668 712 ntBASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
COMMD4Q9H0A8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 LINC00896-202ENST00000609602 2128 ntBASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD4Q9H0A8 KSR1P1-201ENST00000446298 240 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms