Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 GNAS-203ENST00000306120 1878 ntBASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 AP002982.1-201ENST00000492365 877 ntBASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 REXO1L9P-201ENST00000604264 2108 ntBASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 RCC2P3-201ENST00000418112 1537 ntBASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 GCSHP5-201ENST00000443090 522 ntBASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 MYLKP1-201ENST00000509077 1580 ntBASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.56■□□□□ 0.4
THUMPD3Q9BV44 AC008556.1-201ENST00000610908 2040 ntBASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 NIFKP9-201ENST00000419265 221 ntBASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 AC004980.1-204ENST00000429707 299 ntBASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 RPS2P4-201ENST00000476944 856 ntBASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.55■□□□□ 0.4
THUMPD3Q9BV44 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms