Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALR3Q96L12 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.41■□□□□ 0.7
CALR3Q96L12 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.41■□□□□ 0.7
CALR3Q96L12 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.41■□□□□ 0.7
CALR3Q96L12 CD99P1-205ENST00000527459 561 ntBASIC19.41■□□□□ 0.7
CALR3Q96L12 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.41■□□□□ 0.7
CALR3Q96L12 SLC25A1P4-201ENST00000567977 778 ntBASIC19.41■□□□□ 0.7
CALR3Q96L12 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.41■□□□□ 0.7
CALR3Q96L12 AL359736.2-201ENST00000621992 437 ntBASIC19.41■□□□□ 0.7
CALR3Q96L12 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALR3Q96L12 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CALR3Q96L12 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALR3Q96L12 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CALR3Q96L12 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALR3Q96L12 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CALR3Q96L12 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CALR3Q96L12 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
CALR3Q96L12 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.41■□□□□ 0.7
CALR3Q96L12 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CALR3Q96L12 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALR3Q96L12 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALR3Q96L12 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.41■□□□□ 0.7
CALR3Q96L12 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALR3Q96L12 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CALR3Q96L12 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALR3Q96L12 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALR3Q96L12 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.41■□□□□ 0.7
CALR3Q96L12 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.4■□□□□ 0.7
CALR3Q96L12 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 AC036111.1-201ENST00000533973 1582 ntBASIC19.4■□□□□ 0.7
CALR3Q96L12 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.4■□□□□ 0.7
CALR3Q96L12 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.4■□□□□ 0.7
CALR3Q96L12 PHGDH-209ENST00000641074 1780 ntBASIC19.4■□□□□ 0.7
CALR3Q96L12 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.4■□□□□ 0.7
CALR3Q96L12 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.4■□□□□ 0.7
CALR3Q96L12 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.4■□□□□ 0.7
CALR3Q96L12 MIR3180-4-201ENST00000582223 153 ntBASIC19.4■□□□□ 0.7
CALR3Q96L12 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.4■□□□□ 0.7
CALR3Q96L12 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CALR3Q96L12 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALR3Q96L12 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.4■□□□□ 0.7
CALR3Q96L12 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.39■□□□□ 0.7
CALR3Q96L12 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CALR3Q96L12 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.39■□□□□ 0.7
CALR3Q96L12 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CALR3Q96L12 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CALR3Q96L12 AC138932.1-201ENST00000534164 6830 ntBASIC19.39■□□□□ 0.7
CALR3Q96L12 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.39■□□□□ 0.69
CALR3Q96L12 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CALR3Q96L12 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALR3Q96L12 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALR3Q96L12 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CALR3Q96L12 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.39■□□□□ 0.69
CALR3Q96L12 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CALR3Q96L12 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.39■□□□□ 0.69
CALR3Q96L12 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALR3Q96L12 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.39■□□□□ 0.69
CALR3Q96L12 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CALR3Q96L12 AC097488.1-201ENST00000507834 756 ntBASIC19.39■□□□□ 0.69
CALR3Q96L12 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.39■□□□□ 0.69
CALR3Q96L12 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CALR3Q96L12 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.39■□□□□ 0.69
CALR3Q96L12 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CALR3Q96L12 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALR3Q96L12 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALR3Q96L12 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.39■□□□□ 0.69
CALR3Q96L12 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALR3Q96L12 SIRPAP1-201ENST00000448467 1770 ntBASIC19.39■□□□□ 0.69
CALR3Q96L12 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.39■□□□□ 0.69
CALR3Q96L12 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALR3Q96L12 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CALR3Q96L12 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALR3Q96L12 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.39■□□□□ 0.69
CALR3Q96L12 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALR3Q96L12 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CALR3Q96L12 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CALR3Q96L12 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CALR3Q96L12 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CALR3Q96L12 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CALR3Q96L12 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CALR3Q96L12 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.38■□□□□ 0.69
CALR3Q96L12 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CALR3Q96L12 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms