Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.9■□□□□ 0.62
IFT43Q96FT9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT43Q96FT9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT43Q96FT9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT43Q96FT9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.9■□□□□ 0.62
IFT43Q96FT9 TSPY5P-201ENST00000426936 936 ntBASIC18.9■□□□□ 0.62
IFT43Q96FT9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
IFT43Q96FT9 YBX1P2-201ENST00000489612 999 ntBASIC18.9■□□□□ 0.62
IFT43Q96FT9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IFT43Q96FT9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
IFT43Q96FT9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.9■□□□□ 0.62
IFT43Q96FT9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT43Q96FT9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
IFT43Q96FT9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.9■□□□□ 0.62
IFT43Q96FT9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.9■□□□□ 0.62
IFT43Q96FT9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT43Q96FT9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
IFT43Q96FT9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
IFT43Q96FT9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
IFT43Q96FT9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT43Q96FT9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
IFT43Q96FT9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IFT43Q96FT9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT43Q96FT9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT43Q96FT9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.89■□□□□ 0.61
IFT43Q96FT9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.89■□□□□ 0.61
IFT43Q96FT9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IFT43Q96FT9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.89■□□□□ 0.61
IFT43Q96FT9 MIR3180-5-201ENST00000583743 153 ntBASIC18.89■□□□□ 0.61
IFT43Q96FT9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
IFT43Q96FT9 AC139887.4-201ENST00000607877 719 ntBASIC18.89■□□□□ 0.61
IFT43Q96FT9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
IFT43Q96FT9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT43Q96FT9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
IFT43Q96FT9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.89■□□□□ 0.61
IFT43Q96FT9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT43Q96FT9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.89■□□□□ 0.61
IFT43Q96FT9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT43Q96FT9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT43Q96FT9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
IFT43Q96FT9 AC135050.7-201ENST00000624508 2218 ntBASIC18.89■□□□□ 0.61
IFT43Q96FT9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.89■□□□□ 0.61
IFT43Q96FT9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
IFT43Q96FT9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.88■□□□□ 0.61
IFT43Q96FT9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 MIR4674-201ENST00000582457 87 ntBASIC18.88■□□□□ 0.61
IFT43Q96FT9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 MYC-208ENST00000641036 567 ntBASIC18.88■□□□□ 0.61
IFT43Q96FT9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT43Q96FT9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
IFT43Q96FT9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IFT43Q96FT9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
IFT43Q96FT9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IFT43Q96FT9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IFT43Q96FT9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IFT43Q96FT9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IFT43Q96FT9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IFT43Q96FT9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IFT43Q96FT9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IFT43Q96FT9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IFT43Q96FT9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IFT43Q96FT9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.87■□□□□ 0.61
IFT43Q96FT9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IFT43Q96FT9 AC009113.1-201ENST00000570267 2443 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms