Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN23Q96B33 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN23Q96B33 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN23Q96B33 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN23Q96B33 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLDN23Q96B33 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN23Q96B33 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLDN23Q96B33 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.26■□□□□ 0.51
CLDN23Q96B33 LAGE3P1-201ENST00000425356 484 ntBASIC18.26■□□□□ 0.51
CLDN23Q96B33 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN23Q96B33 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN23Q96B33 AP006288.1-201ENST00000446065 395 ntBASIC18.26■□□□□ 0.51
CLDN23Q96B33 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN23Q96B33 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN23Q96B33 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN23Q96B33 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CLDN23Q96B33 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.26■□□□□ 0.51
CLDN23Q96B33 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLDN23Q96B33 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN23Q96B33 AP000867.4-201ENST00000641616 219 ntBASIC18.26■□□□□ 0.51
CLDN23Q96B33 SDHAP2-201ENST00000455183 2001 ntBASIC18.26■□□□□ 0.51
CLDN23Q96B33 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN23Q96B33 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN23Q96B33 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN23Q96B33 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN23Q96B33 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN23Q96B33 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN23Q96B33 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CLDN23Q96B33 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN23Q96B33 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN23Q96B33 AC125437.2-201ENST00000625180 2167 ntBASIC18.25■□□□□ 0.51
CLDN23Q96B33 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN23Q96B33 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLDN23Q96B33 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN23Q96B33 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN23Q96B33 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN23Q96B33 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN23Q96B33 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN23Q96B33 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN23Q96B33 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN23Q96B33 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN23Q96B33 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN23Q96B33 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN23Q96B33 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN23Q96B33 AC007967.2-201ENST00000432613 625 ntBASIC18.25■□□□□ 0.51
CLDN23Q96B33 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.25■□□□□ 0.51
CLDN23Q96B33 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN23Q96B33 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN23Q96B33 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN23Q96B33 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.25■□□□□ 0.51
CLDN23Q96B33 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN23Q96B33 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN23Q96B33 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN23Q96B33 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CLDN23Q96B33 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN23Q96B33 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLDN23Q96B33 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN23Q96B33 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN23Q96B33 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN23Q96B33 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.24■□□□□ 0.51
CLDN23Q96B33 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN23Q96B33 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN23Q96B33 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN23Q96B33 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN23Q96B33 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN23Q96B33 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CLDN23Q96B33 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN23Q96B33 KRT18P65-201ENST00000439811 1286 ntBASIC18.24■□□□□ 0.51
CLDN23Q96B33 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.24■□□□□ 0.51
CLDN23Q96B33 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN23Q96B33 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN23Q96B33 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN23Q96B33 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN23Q96B33 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN23Q96B33 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN23Q96B33 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN23Q96B33 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN23Q96B33 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CLDN23Q96B33 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN23Q96B33 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN23Q96B33 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CLDN23Q96B33 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CLDN23Q96B33 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN23Q96B33 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN23Q96B33 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN23Q96B33 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN23Q96B33 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN23Q96B33 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN23Q96B33 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CLDN23Q96B33 AC211486.1-202ENST00000416371 468 ntBASIC18.23■□□□□ 0.51
CLDN23Q96B33 AC023274.1-201ENST00000418278 595 ntBASIC18.23■□□□□ 0.51
CLDN23Q96B33 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN23Q96B33 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN23Q96B33 AC211476.1-201ENST00000503899 468 ntBASIC18.23■□□□□ 0.51
CLDN23Q96B33 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN23Q96B33 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.23■□□□□ 0.51
CLDN23Q96B33 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN23Q96B33 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN23Q96B33 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN23Q96B33 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms