Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SCAMP4Q969E2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.19■□□□□ 0.5
SCAMP4Q969E2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCAMP4Q969E2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.19■□□□□ 0.5
SCAMP4Q969E2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.19■□□□□ 0.5
SCAMP4Q969E2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCAMP4Q969E2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCAMP4Q969E2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.19■□□□□ 0.5
SCAMP4Q969E2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.19■□□□□ 0.5
SCAMP4Q969E2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SCAMP4Q969E2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCAMP4Q969E2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.19■□□□□ 0.5
SCAMP4Q969E2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SCAMP4Q969E2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 AC005332.3-201ENST00000589904 676 ntBASIC18.17■□□□□ 0.5
SCAMP4Q969E2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAMP4Q969E2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 ESPNP-201ENST00000270691 2015 ntBASIC18.16■□□□□ 0.5
SCAMP4Q969E2 Z83836.1-201ENST00000624605 1642 ntBASIC18.16■□□□□ 0.5
SCAMP4Q969E2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCAMP4Q969E2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms