Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
AP3S1Q92572 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.18■□□□□ 0.18
AP3S1Q92572 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.18■□□□□ 0.18
AP3S1Q92572 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.18■□□□□ 0.18
AP3S1Q92572 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.18■□□□□ 0.18
AP3S1Q92572 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
AP3S1Q92572 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.18■□□□□ 0.18
AP3S1Q92572 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
AP3S1Q92572 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
AP3S1Q92572 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
AP3S1Q92572 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.18■□□□□ 0.18
AP3S1Q92572 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.18■□□□□ 0.18
AP3S1Q92572 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.18■□□□□ 0.18
AP3S1Q92572 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
AP3S1Q92572 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.17■□□□□ 0.18
AP3S1Q92572 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
AP3S1Q92572 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
AP3S1Q92572 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 LINC00602-201ENST00000629776 2065 ntBASIC16.17■□□□□ 0.18
AP3S1Q92572 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
AP3S1Q92572 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 AL096828.2-201ENST00000567259 1965 ntBASIC16.17■□□□□ 0.18
AP3S1Q92572 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.17■□□□□ 0.18
AP3S1Q92572 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.17■□□□□ 0.18
AP3S1Q92572 LSM12P1-201ENST00000411836 588 ntBASIC16.17■□□□□ 0.18
AP3S1Q92572 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.17■□□□□ 0.18
AP3S1Q92572 CNN2P6-201ENST00000439038 900 ntBASIC16.17■□□□□ 0.18
AP3S1Q92572 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 KRT18P61-201ENST00000585825 1298 ntBASIC16.17■□□□□ 0.18
AP3S1Q92572 AC005181.1-201ENST00000604782 1256 ntBASIC16.17■□□□□ 0.18
AP3S1Q92572 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
AP3S1Q92572 OR10C1-204ENST00000622521 1039 ntBASIC16.17■□□□□ 0.18
AP3S1Q92572 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.17■□□□□ 0.18
AP3S1Q92572 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.17■□□□□ 0.18
AP3S1Q92572 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.17■□□□□ 0.18
AP3S1Q92572 MYLKP1-201ENST00000509077 1580 ntBASIC16.17■□□□□ 0.18
AP3S1Q92572 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S1Q92572 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
AP3S1Q92572 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 KRT8P32-201ENST00000512863 1461 ntBASIC16.16■□□□□ 0.18
AP3S1Q92572 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
AP3S1Q92572 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.16■□□□□ 0.18
AP3S1Q92572 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
AP3S1Q92572 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
AP3S1Q92572 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
AP3S1Q92572 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.16■□□□□ 0.18
AP3S1Q92572 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.16■□□□□ 0.18
AP3S1Q92572 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 RPS2P52-201ENST00000469610 820 ntBASIC16.16■□□□□ 0.18
AP3S1Q92572 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.16■□□□□ 0.18
AP3S1Q92572 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
AP3S1Q92572 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
AP3S1Q92572 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
AP3S1Q92572 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.16■□□□□ 0.18
AP3S1Q92572 AL357033.4-201ENST00000617703 1807 ntBASIC16.16■□□□□ 0.18
AP3S1Q92572 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
AP3S1Q92572 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S1Q92572 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms