Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 MIR1238-201ENST00000408483 83 ntBASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 CKBP1-201ENST00000565489 1086 ntBASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 DGCR10-201ENST00000609839 495 ntBASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 AL162741.1-201ENST00000565563 1558 ntBASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP61Q8NHU2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CFAP61Q8NHU2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CFAP61Q8NHU2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
CFAP61Q8NHU2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CFAP61Q8NHU2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CFAP61Q8NHU2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CFAP61Q8NHU2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CFAP61Q8NHU2 AC106820.2-201ENST00000563775 3264 ntBASIC18.58■□□□□ 0.57
CFAP61Q8NHU2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.58■□□□□ 0.57
CFAP61Q8NHU2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.58■□□□□ 0.57
CFAP61Q8NHU2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CFAP61Q8NHU2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 AL512353.2-201ENST00000448759 1962 ntBASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CFAP61Q8NHU2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 AC009053.2-201ENST00000563701 2365 ntBASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP61Q8NHU2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms