Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 AL024508.2-201ENST00000607749 1894 ntBASIC20.71■□□□□ 0.91
SHC4Q6S5L8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SHC4Q6S5L8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
SHC4Q6S5L8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHC4Q6S5L8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SHC4Q6S5L8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHC4Q6S5L8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHC4Q6S5L8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SHC4Q6S5L8 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.7■□□□□ 0.9
SHC4Q6S5L8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.7■□□□□ 0.9
SHC4Q6S5L8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.7■□□□□ 0.9
SHC4Q6S5L8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.7■□□□□ 0.9
SHC4Q6S5L8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.7■□□□□ 0.9
SHC4Q6S5L8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.7■□□□□ 0.9
SHC4Q6S5L8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHC4Q6S5L8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.7■□□□□ 0.9
SHC4Q6S5L8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHC4Q6S5L8 AC093010.1-201ENST00000473625 1624 ntBASIC20.7■□□□□ 0.9
SHC4Q6S5L8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SHC4Q6S5L8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 LINC00896-202ENST00000609602 2128 ntBASIC20.69■□□□□ 0.9
SHC4Q6S5L8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.69■□□□□ 0.9
SHC4Q6S5L8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC4Q6S5L8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 FAM87A-204ENST00000613235 858 ntBASIC20.68■□□□□ 0.9
SHC4Q6S5L8 GNAS-203ENST00000306120 1878 ntBASIC20.68■□□□□ 0.9
SHC4Q6S5L8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC4Q6S5L8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms