Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 MYLKP1-201ENST00000509077 1580 ntBASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCDC62Q6P9F0 AC116562.4-201ENST00000641316 2276 ntBASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 KRT16P4-201ENST00000453883 522 ntBASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 LINC01711-201ENST00000598340 967 ntBASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.58■□□□□ 0.89
CCDC62Q6P9F0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC62Q6P9F0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC62Q6P9F0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.58■□□□□ 0.88
CCDC62Q6P9F0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC62Q6P9F0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 VENTXP7-201ENST00000475503 772 ntBASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 AC011840.4-201ENST00000578471 627 ntBASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CCDC62Q6P9F0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 AL024508.2-201ENST00000607749 1894 ntBASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 AC099343.3-201ENST00000605834 2503 ntBASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 AC112777.1-201ENST00000540175 1423 ntBASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 AKR1C7P-201ENST00000305623 895 ntBASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC62Q6P9F0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms